RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 RNF8O76064 485 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 MKRN4PQ13434 485 aaPredicted RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 UAP1Q16222 522 aaPredicted RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 KCTD19Q17RG1 926 aaPredicted RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 PPP1R15BQ5SWA1 713 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 FBXO31Q5XUX0 539 aaPredicted RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 TRIM68Q6AZZ1 485 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 GPIHBP1Q8IV16 184 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 WHAMMQ8TF30 809 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
PTPA-223ENST00000452489 CHD1O14646 1710 aa20.61■□□□□ 0.89
PTPA-223ENST00000452489 TRIM49BA6NDI0 452 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 LGALS16A8MUM7 142 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 PTPRUQ92729 1446 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 KRT12Q99456 494 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 ZNHIT6Q9NWK9 470 aaKnown RBP20.6■□□□□ 0.89
PTPA-223ENST00000452489 CHCHD3Q9NX63 227 aaKnown RBP20.6■□□□□ 0.89
PTPA-223ENST00000452489 MYH13Q9UKX3 1938 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 APOA5Q6Q788 366 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 CCDC170Q8IYT3 715 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 SYMPKQ92797 1274 aaKnown RBP20.6■□□□□ 0.89
PTPA-223ENST00000452489 CHMP6Q96FZ7 201 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 TLR10Q9BXR5 811 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 ANGEL1Q9UNK9 670 aaKnown RBP20.6■□□□□ 0.89
PTPA-223ENST00000452489 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
PTPA-223ENST00000452489 NUTM2BA6NNL0 878 aaPredicted RBP20.59■□□□□ 0.89
PTPA-223ENST00000452489 NUTM2EB1AL46 878 aaPredicted RBP20.59■□□□□ 0.89
PTPA-223ENST00000452489 GSTA1P08263 222 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 MAGOHP61326 146 aaKnown RBP20.59■□□□□ 0.89
PTPA-223ENST00000452489 CYB5R4Q7L1T6 521 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 GALNT15Q8N3T1 639 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 ANKRD13CQ8N6S4 541 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 ZNF507Q8TCN5 953 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 MAGOHBQ96A72 148 aaKnown RBP20.59■□□□□ 0.89
PTPA-223ENST00000452489 IFIH1Q9BYX4 1025 aaKnown RBP20.59■□□□□ 0.89
PTPA-223ENST00000452489 CEP131Q9UPN4 1083 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 RASSF10A6NK89 507 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 MMP1P03956 469 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 TRIM21P19474 475 aaKnown RBP20.59■□□□□ 0.89
PTPA-223ENST00000452489 SPA17Q15506 151 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 TAF11Q15544 211 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 RILPL1Q5EBL4 403 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 MTHFD1LQ6UB35 978 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 TEKT4Q8WW24 435 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 LRRC4CQ9HCJ2 640 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 SALL4Q9UJQ4 1053 aa20.59■□□□□ 0.89
PTPA-223ENST00000452489 MYH10P35580 1976 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 CFAP73A6NFT4 308 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 BTBD11A6QL63 1104 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 STXBP3O00186 592 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 CLSTN1O94985 981 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 LUC7L3O95232 432 aaKnown RBP20.58■□□□□ 0.89
PTPA-223ENST00000452489 NQO1P15559 274 aaKnown RBP20.58■□□□□ 0.89
PTPA-223ENST00000452489 CCND1P24385 295 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 CTNNA1P35221 906 aaKnown RBP20.58■□□□□ 0.89
PTPA-223ENST00000452489 ARHGAP22Q7Z5H3 698 aa20.58■□□□□ 0.89
PTPA-223ENST00000452489 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.89
PTPA-223ENST00000452489 RNASE9P60153 205 aaKnown RBP20.58■□□□□ 0.88
PTPA-223ENST00000452489 TIMM10P62072 90 aa20.58■□□□□ 0.88
PTPA-223ENST00000452489 HLTFQ14527 1009 aaKnown RBP eCLIP20.58■□□□□ 0.88
PTPA-223ENST00000452489 C1QTNF12Q5T7M4 302 aa20.58■□□□□ 0.88
PTPA-223ENST00000452489 LRIG3Q6UXM1 1119 aa20.58■□□□□ 0.88
PTPA-223ENST00000452489 NLRP3Q96P20 1036 aa20.58■□□□□ 0.88
PTPA-223ENST00000452489 TTYH3Q9C0H2 523 aa20.58■□□□□ 0.88
PTPA-223ENST00000452489 GDAQ9Y2T3 454 aa20.58■□□□□ 0.88
PTPA-223ENST00000452489 XDHP47989 1333 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 A0A1W2PQC6 194 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 USO1O60763 962 aaKnown RBP20.57■□□□□ 0.88
PTPA-223ENST00000452489 MXRA7P84157 204 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 CFAP221Q4G0U5 840 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 OXER1Q8TDS5 423 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 TBC1D5Q92609 795 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 GORASP1Q9BQQ3 440 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 GGT7Q9UJ14 662 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
PTPA-223ENST00000452489 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 PCDHA13Q9Y5I0 950 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 PPFIA2O75334 1257 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 BIRC3Q13489 604 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
PTPA-223ENST00000452489 WASHC4Q2M389 1173 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 HHATQ5VTY9 493 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 ANKS4BQ8N8V4 417 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 NAF1Q96HR8 494 aaKnown RBP20.57■□□□□ 0.88
PTPA-223ENST00000452489 CCDC42Q96M95 316 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 ABCF3Q9NUQ8 709 aa20.57■□□□□ 0.88
PTPA-223ENST00000452489 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 GOLGA8AA7E2F4 631 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 EEF2KMTQ96G04 330 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 USP6P35125 1406 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 FAM205CA6NFA0 338 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 RAD51CO43502 376 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 CTNND1O60716 968 aaKnown RBP20.56■□□□□ 0.88
PTPA-223ENST00000452489 ATP2A2P16615 1042 aaKnown RBP20.56■□□□□ 0.88
PTPA-223ENST00000452489 CTDSPL2Q05D32 466 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 PDIA5Q14554 519 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 NUGGCQ68CJ6 796 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 ANO7Q6IWH7 933 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms