RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PF4V1P10720 104 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 L1CAMP32004 1257 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 CLK1P49759 484 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 AK2P54819 239 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 FCGRTP55899 365 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 NEXNQ0ZGT2 675 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 WASHC5Q12768 1159 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 TRIM14Q14142 442 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 GPR158Q5T848 1215 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 NUTM2GQ5VZR2 741 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 DTHD1Q6ZMT9 781 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SV2BQ7L1I2 683 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 LSRQ86X29 649 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 NKAPQ8N5F7 415 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 DDX54Q8TDD1 881 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 COG1Q8WTW3 980 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 CCDC47Q96A33 483 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 CDHR1Q96JP9 859 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 LRGUKQ96M69 825 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 CLUHP3Q96NS8 147 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 IPO9Q96P70 1041 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 FMNL2Q96PY5 1086 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 TMPRSS13Q9BYE2 586 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SEZ6LQ9BYH1 1024 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 CYP4F12Q9HCS2 524 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SH3GLB2Q9NR46 395 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 INTS7Q9NVH2 962 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SAP30BPQ9UHR5 308 aaKnown RBP5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZBTB21Q9ULJ3 1066 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 PCDHGB3Q9Y5G1 929 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 SLC4A7Q9Y6M7 1214 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 ROBO2Q9HCK4 1378 aa5.26□□□□□ -1.57
HMGB3P21-201ENST00000452483 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 ERC2O15083 957 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 GAS2O43903 313 aaKnown RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 ADCY3O60266 1144 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 TIAF1O95411 115 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 IMPDH2P12268 514 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 FSTP19883 344 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 SDSP20132 328 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 MAOBP27338 520 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 CYP2C19P33261 490 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 ADD2P35612 726 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 NEK4P51957 841 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 FAAP100Q0VG06 881 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 MAP7Q14244 749 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 POU4F3Q15319 338 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 DHCR24Q15392 516 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 PDCD2Q16342 344 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 RPS26P11Q5JNZ5 115 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZMYM1Q5SVZ6 1142 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 MRM1Q6IN84 353 aaKnown RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 RPAINQ86UA6 219 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 LMNTD2Q8IXW0 634 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 SPATA5Q8NB90 893 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 SMG8Q8ND04 991 aaKnown RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 GIMAP8Q8ND71 665 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 C3orf58Q8NDZ4 430 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 DDX1Q92499 740 aaKnown RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 TMEM87BQ96K49 555 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 CDC6Q99741 560 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 DHRS4Q9BTZ2 278 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 CENPOQ9BU64 300 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 AP1M1Q9BXS5 423 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 SUGCTQ9HAC7 445 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 KIAA1586Q9HCI6 787 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 SMC4Q9NTJ3 1288 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 ABCF2Q9UG63 623 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 DDX20Q9UHI6 824 aaKnown RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 PNMA8BQ9ULN7 279 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 PPM1HQ9ULR3 514 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 ANKRD6Q9Y2G4 727 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 HIF3AQ9Y2N7 669 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 RAXQ9Y2V3 346 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 SH3BP1Q9Y3L3 701 aa5.25□□□□□ -1.57
HMGB3P21-201ENST00000452483 GOLGA6L6A8MZA4 724 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 K7ENM7 598 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 ECEL1O95672 775 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 CTSBP07858 339 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 NCAM1P13591 858 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 OAS2P29728 719 aaKnown RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 AP3B2Q13367 1082 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 ABCB5Q2M3G0 1257 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 CWF19L2Q2TBE0 894 aaKnown RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 HP1BP3Q5SSJ5 553 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 GJC2Q5T442 439 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 FAM180BQ6P0A1 224 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 PKN3Q6P5Z2 889 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 LDHAL6AQ6ZMR3 332 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 GK5Q6ZS86 529 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 PNMA8AQ86V59 439 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 SNX32Q86XE0 403 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 FAM20CQ8IXL6 584 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 NAXEQ8NCW5 288 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 FBXO27Q8NI29 283 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 ANKRD24Q8TF21 1146 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 FRS2Q8WU20 508 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 NUP133Q8WUM0 1156 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms