RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SLC35G1Q2M3R5 365 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 CMTR1Q8N1G2 835 aaKnown RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 IL17RAQ96F46 866 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 DDX20Q9UHI6 824 aaKnown RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 FAM184BQ9ULE4 1060 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 V9GY48 417 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 PPP1R11O60927 126 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 ZNF865P0CJ78 1059 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 NEK4P51957 841 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 TOB2Q14106 344 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 LHX8Q68G74 356 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 ARMCX2Q7L311 632 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 ARRDC4Q8NCT1 418 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 IL27Q8NEV9 243 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 NSUN6Q8TEA1 469 aaKnown RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 CUL5Q93034 780 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 C22orf23Q9BZE7 217 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 FAM217BQ9NTX9 383 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
COL8A1-203ENST00000452013 OGDHLQ9ULD0 1010 aa10.25□□□□□ -0.77
COL8A1-203ENST00000452013 hCG_1984214I3L0E3 225 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 CPLX1O14810 134 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 RARBP10826 455 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 AKR1A1P14550 325 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 CDC27P30260 824 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 ALDH5A1P51649 535 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-203ENST00000452013 HSD17B4P51659 736 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
COL8A1-203ENST00000452013 GHRHRQ02643 423 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 MLLT1Q03111 559 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-203ENST00000452013 PDE4DQ08499 809 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 IQSEC1Q6DN90 963 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 TEX2Q8IWB9 1127 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 ZNF713Q8N859 430 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-203ENST00000452013 TRPV1Q8NER1 839 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 MORC4Q8TE76 937 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 FGD4Q96M96 766 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 TAAR1Q96RJ0 339 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 RMDN3Q96TC7 470 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 ZHX1Q9UKY1 873 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-203ENST00000452013 MYH8P13535 1937 aa10.24□□□□□ -0.77
COL8A1-203ENST00000452013 LAMA4Q16363 1823 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
COL8A1-203ENST00000452013 IFNAR1P17181 557 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 FUT2Q10981 343 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 STXBP2Q15833 593 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 HEATR3Q7Z4Q2 680 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 NECAB2Q7Z6G3 386 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
COL8A1-203ENST00000452013 GLT8D2Q9H1C3 349 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 SLKQ9H2G2 1235 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-203ENST00000452013 PSTPIP2Q9H939 334 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 SPC25Q9HBM1 224 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 VTA1Q9NP79 307 aa10.23□□□□□ -0.77
COL8A1-203ENST00000452013 A0A0G2JMZ2 1700 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 hCG_1642624A0A1W2PR95 340 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 OPLAHO14841 1288 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 DUSP11O75319 330 aaKnown RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 CDKL5O76039 1030 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 FARP2O94887 1054 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 RBM25P49756 843 aaKnown RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 AK2P54819 239 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 CCDC144BQ3MJ40 725 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 NOL8Q76FK4 1167 aaKnown RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 RNF180Q86T96 592 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 FCHSD1Q86WN1 690 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 CCDC12Q8WUD4 166 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 LARP6Q9BRS8 491 aaKnown RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-203ENST00000452013 BACH2Q9BYV9 841 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 XPNPEP3Q9NQH7 507 aa10.22□□□□□ -0.77
COL8A1-203ENST00000452013 RLFQ13129 1914 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 SMCO2A6NFE2 343 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 KBTBD13C9JR72 458 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 PFKFB2O60825 505 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
COL8A1-203ENST00000452013 NR3C2P08235 984 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 SCG2P13521 617 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 EDNRBP24530 442 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 NAPAP54920 295 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 STK3Q13188 491 aa10.21□□□□□ -0.77
COL8A1-203ENST00000452013 NTRK3Q16288 839 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms