RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GNASQ5JWF2 1037 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
USP54-207ENST00000451492 TBC1D5Q92609 795 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 LRRC2Q9BYS8 371 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
USP54-207ENST00000451492 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
USP54-207ENST00000451492 ABCB11O95342 1321 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 SLC27A2O14975 620 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.61
USP54-207ENST00000451492 PRC1O43663 620 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 CFBP00751 764 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 CLTBP09497 229 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 GJA9P57773 515 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 TLE2Q04725 743 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
USP54-207ENST00000451492 GRM4Q14833 912 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 SNX17Q15036 470 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 CREB3L3Q68CJ9 461 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 NFXL1Q6ZNB6 911 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 GLT1D1Q96MS3 346 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 AP5M1Q9H0R1 490 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
USP54-207ENST00000451492 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
USP54-207ENST00000451492 LAMA3Q16787 3333 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 CDC45O75419 566 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 EIF2AK2P19525 551 aaKnown RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 RXRAP19793 462 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 CST5P28325 142 aaPredicted RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 CCSAPQ6IQ19 270 aaPredicted RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 CATIPQ7Z7H3 387 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 PCSK9Q8NBP7 692 aaKnown RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 OR6J1Q8NGC5 347 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 COPS5Q92905 334 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 BADQ92934 168 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 TRIM43Q96BQ3 446 aaPredicted RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 PIGSQ96S52 555 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 MPHOSPH6Q99547 160 aaKnown RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
USP54-207ENST00000451492 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
USP54-207ENST00000451492 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
USP54-207ENST00000451492 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
USP54-207ENST00000451492 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 ZBTB5O15062 677 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 CTAGE5O15320 804 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 BMP8BP34820 402 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 FSCN1Q16658 493 aaKnown RBP11.25□□□□□ -0.61
USP54-207ENST00000451492 SLC35G1Q2M3R5 365 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 PPP1R13LQ8WUF5 828 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 WDR11Q9BZH6 1224 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 LY9Q9HBG7 655 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 COL20A1Q9P218 1284 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
USP54-207ENST00000451492 PCDHA1Q9Y5I3 950 aa11.25□□□□□ -0.61
USP54-207ENST00000451492 GBF1Q92538 1859 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 SH2B2O14492 632 aaPredicted RBP11.24□□□□□ -0.61
USP54-207ENST00000451492 SORBS3O60504 671 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 MYL3P08590 195 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 RAG1P15918 1043 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 ITGB8P26012 769 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 HOXA13P31271 388 aaPredicted RBP11.24□□□□□ -0.61
USP54-207ENST00000451492 MCM5P33992 734 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 CHMP4BP1P59074 171 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 PSMC6P62333 389 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 ARHGEF16Q5VV41 709 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 IQSEC1Q6DN90 963 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 CMTR1Q8N1G2 835 aaKnown RBP11.24□□□□□ -0.61
USP54-207ENST00000451492 DNERQ8NFT8 737 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 CTCFLQ8NI51 663 aaPredicted RBP11.24□□□□□ -0.61
USP54-207ENST00000451492 SYTL5Q8TDW5 730 aaPredicted RBP11.24□□□□□ -0.61
USP54-207ENST00000451492 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
USP54-207ENST00000451492 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
USP54-207ENST00000451492 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms