RNA–Protein interactions for RNA: ENST00000449228.5

BBC3-204, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-204ENST00000449228 SLFN14P0C7P3 912 aa28.23■■■□□ 2.11
BBC3-204ENST00000449228 CCDC173Q0VFZ6 552 aa28.23■■■□□ 2.11
BBC3-204ENST00000449228 PNOCQ13519 176 aa28.23■■■□□ 2.11
BBC3-204ENST00000449228 RPAP3Q9H6T3 665 aaPredicted RBP28.23■■■□□ 2.11
BBC3-204ENST00000449228 DDX25Q9UHL0 483 aaKnown RBP28.23■■■□□ 2.11
BBC3-204ENST00000449228 TUBE1Q9UJT0 475 aa28.23■■■□□ 2.11
BBC3-204ENST00000449228 FLOT1O75955 427 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 UBA7P41226 1012 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 MAP3K9P80192 1104 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 PNMA2Q9UL42 364 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 ICAM1P05362 532 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 FDX1P10109 184 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 NF2P35240 595 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 MDM2Q00987 491 aaPredicted RBP28.22■■■□□ 2.11
BBC3-204ENST00000449228 TMEM266Q2M3C6 531 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 LDHDQ86WU2 507 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 MTMR9Q96QG7 549 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 RAB34Q9BZG1 259 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 CBX8Q9HC52 389 aa28.22■■■□□ 2.11
BBC3-204ENST00000449228 CTDP1Q9Y5B0 961 aaPredicted RBP28.22■■■□□ 2.11
BBC3-204ENST00000449228 POLR2AP24928 1970 aaKnown RBP28.22■■■□□ 2.11
BBC3-204ENST00000449228 A0A087X0B3 334 aa28.21■■■□□ 2.11
BBC3-204ENST00000449228 NLRP12P59046 1061 aa28.21■■■□□ 2.11
BBC3-204ENST00000449228 RASSF8Q8NHQ8 419 aa28.21■■■□□ 2.11
BBC3-204ENST00000449228 C12orf42Q96LP6 360 aa28.21■■■□□ 2.11
BBC3-204ENST00000449228 CCDC39Q9UFE4 941 aa28.21■■■□□ 2.11
BBC3-204ENST00000449228 PPP1R9AQ9ULJ8 1098 aa28.21■■■□□ 2.11
BBC3-204ENST00000449228 GCOM1H8Y6P7 765 aaPredicted RBP28.2■■■□□ 2.11
BBC3-204ENST00000449228 OPLAHO14841 1288 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 SLC37A4O43826 429 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 EDIL3O43854 480 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 POLR2MP0CAP2 368 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 DGKZQ13574 1117 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 MOXD1Q6UVY6 613 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 CCSER1Q9C0I3 900 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 TMOD4Q9NZQ9 345 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 CCPG1Q9ULG6 757 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 CSADQ9Y600 493 aa28.2■■■□□ 2.11
BBC3-204ENST00000449228 TXKP42681 527 aa28.2■■■□□ 2.1
BBC3-204ENST00000449228 IREB2P48200 963 aaKnown RBP28.2■■■□□ 2.1
BBC3-204ENST00000449228 MARCH6O60337 910 aa28.19■■■□□ 2.1
BBC3-204ENST00000449228 CFBP00751 764 aa28.19■■■□□ 2.1
BBC3-204ENST00000449228 TAL1P17542 331 aaPredicted RBP28.19■■■□□ 2.1
BBC3-204ENST00000449228 ARHGAP4P98171 946 aa28.19■■■□□ 2.1
BBC3-204ENST00000449228 PCDHA5Q9Y5H7 936 aa28.19■■■□□ 2.1
BBC3-204ENST00000449228 CYP3A7-CYP3A51PA0A087WV96 503 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 BIN1O00499 593 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 ZBED4O75132 1171 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 SMC2O95347 1197 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 CYP3A7P24462 503 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 HOXA13P31271 388 aaPredicted RBP28.18■■■□□ 2.1
BBC3-204ENST00000449228 SREBF1P36956 1147 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 TECP42680 631 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 FXR2P51116 673 aaKnown RBP eCLIP28.18■■■□□ 2.14e-8■■□□□ 12.3
BBC3-204ENST00000449228 HMGCS2P54868 508 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 C11orf57Q6ZUT1 292 aaPredicted RBP28.18■■■□□ 2.1
BBC3-204ENST00000449228 LUZP1Q86V48 1076 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 RBM46Q8TBY0 533 aaKnown RBP28.18■■■□□ 2.1
BBC3-204ENST00000449228 SMARCE1Q969G3 411 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 EHMT1Q9H9B1 1298 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 SLC38A10Q9HBR0 1119 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 VGLL4Q14135 290 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 E2F4Q16254 413 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 DISC1Q9NRI5 854 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 AFG3L2Q9Y4W6 797 aa28.18■■■□□ 2.1
BBC3-204ENST00000449228 FOXN1O15353 648 aa28.17■■■□□ 2.1
BBC3-204ENST00000449228 CDC25AP30304 524 aa28.17■■■□□ 2.1
BBC3-204ENST00000449228 STAT6P42226 847 aa28.17■■■□□ 2.1
BBC3-204ENST00000449228 RRAGBQ5VZM2 374 aa28.17■■■□□ 2.1
BBC3-204ENST00000449228 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.17■■■□□ 2.1
BBC3-204ENST00000449228 PNMA8AQ86V59 439 aaPredicted RBP28.17■■■□□ 2.1
BBC3-204ENST00000449228 IGSF22Q8N9C0 903 aa28.17■■■□□ 2.1
BBC3-204ENST00000449228 PAGE5Q96GU1 130 aa28.17■■■□□ 2.1
BBC3-204ENST00000449228 TAF1DQ9H5J8 278 aaPredicted RBP28.17■■■□□ 2.1
BBC3-204ENST00000449228 GOLGA6L19H0YKK7 550 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 KARSQ15046 597 aaKnown RBP28.16■■■□□ 2.1
BBC3-204ENST00000449228 EAPPQ56P03 285 aaPredicted RBP28.16■■■□□ 2.1
BBC3-204ENST00000449228 SH3RF1Q7Z6J0 888 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 CABP7Q86V35 215 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 CRYGNQ8WXF5 182 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 AGBL1Q96MI9 1066 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 PPP1R9BQ96SB3 815 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 SNCAIPQ9Y6H5 919 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 ZNF536O15090 1300 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 SRCAPQ6ZRS2 3230 aa28.16■■■□□ 2.1
BBC3-204ENST00000449228 BECN2A8MW95 431 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 PDIA5Q14554 519 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 NT5DC1Q5TFE4 455 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 DLK2Q6UY11 383 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 FCHSD1Q86WN1 690 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 MCF2L2Q86YR7 1114 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 CDCA5Q96FF9 252 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 A0A087WWV3 80 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 MYH7BA7E2Y1 1941 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 PP2D1A8MPX8 630 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 AFMP43652 599 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 DPCR1Q3MIW9 517 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 CPXCR1Q8N123 301 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 TRIML1Q8N9V2 468 aa28.15■■■□□ 2.1
BBC3-204ENST00000449228 MBOAT7Q96N66 472 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms