RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 BPIFB4P59827 614 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 IFRD2Q12894 506 aaPredicted RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 RPGRIP1Q96KN7 1286 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 PCDHA7Q9UN72 937 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 NUB1Q9Y5A7 615 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 HNRNPDLO14979 420 aaKnown RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 BSPRYQ5W0U4 402 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 ANKRD36BP1Q96IX9 119 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 RIC8AQ9NPQ8 531 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 CCDC160A6NGH7 325 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 POLR2FP61218 127 aaKnown RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 SPATA1Q5VX52 437 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 LARP4BQ92615 738 aaKnown RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 CLIC6Q96NY7 704 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 NOL3O60936 208 aaKnown RBP11.17□□□□□ -0.62
SCN10A-201ENST00000449082 RPS6KA4O75676 772 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 UBXN2AP68543 259 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PPFIBP2Q8ND30 876 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 APOL6Q9BWW8 343 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 B4GALNT4Q76KP1 1039 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 LCORLQ8N3X6 602 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PPP6R2O75170 966 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 MFAP3P55082 362 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 MYL7Q01449 175 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 CUL4BQ13620 913 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 DENND2CQ68D51 928 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
SCN10A-201ENST00000449082 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 ZCCHC11Q5TAX3 1644 aaKnown RBP11.17□□□□□ -0.62
SCN10A-201ENST00000449082 MMP10P09238 476 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PTPREP23469 700 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PTK2Q05397 1052 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 METTL23Q86XA0 190 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 NACC1Q96RE7 527 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 OSBPL3Q9H4L5 887 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
SCN10A-201ENST00000449082 RNF8O76064 485 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 SLC16A2P36021 539 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 ITKQ08881 620 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 CDC42BPGQ6DT37 1551 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 GJA10Q969M2 543 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 ACCSQ96QU6 501 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 OGFRQ9NZT2 677 aa11.17□□□□□ -0.62
SCN10A-201ENST00000449082 CDK12Q9NYV4 1490 aaPredicted RBP11.17□□□□□ -0.62
SCN10A-201ENST00000449082 PFDN6O15212 129 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 MAN1A1P33908 653 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PHBP35232 272 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 EXOC3L4Q17RC7 722 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PIGSQ96S52 555 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PIM2Q9P1W9 311 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PRR36Q9H6K5 1346 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 NT5C2P49902 561 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 SDCCAG8Q86SQ7 713 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 NT5C1BQ96P26 610 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 KRT12Q99456 494 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 IFNB1P01574 187 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 NSFP46459 744 aaKnown RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 SLC10A4Q96EP9 437 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 DISC1Q9NRI5 854 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 ZNF215Q9UL58 517 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 KCNK3O14649 394 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 ZSCAN20P17040 1043 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 INO80BQ9C086 356 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 HYOU1Q9Y4L1 999 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 CYP21A2P08686 494 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PSMC2P35998 433 aaKnown RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 NDUFA8P51970 172 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 MECOMQ03112 1051 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 GKAP1Q5VSY0 366 aaPredicted RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 CACYBPQ9HB71 228 aaKnown RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
SCN10A-201ENST00000449082 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
SCN10A-201ENST00000449082 A0A1W2PQ27 194 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 A0A1W2PQ64 194 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 A0A1W2PQD8 194 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 MAP7Q14244 749 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 CEP85LQ5SZL2 805 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 RINT1Q6NUQ1 792 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 CTAGE3PQ8IX95 158 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 TBCKQ8TEA7 893 aa11.15□□□□□ -0.62
SCN10A-201ENST00000449082 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms