RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CCDC186Q7Z3E2 898 aa20■□□□□ 0.79
LMNA-208ENST00000448611 ZNF541Q9H0D2 1346 aa20■□□□□ 0.79
LMNA-208ENST00000448611 ASNSP08243 561 aa20■□□□□ 0.79
LMNA-208ENST00000448611 ERCC5P28715 1186 aaPredicted RBP20■□□□□ 0.79
LMNA-208ENST00000448611 FXR2P51116 673 aaKnown RBP eCLIP20■□□□□ 0.792e-7■■□□□ 13.3
LMNA-208ENST00000448611 FAM83BQ5T0W9 1011 aa20■□□□□ 0.79
LMNA-208ENST00000448611 CABP7Q86V35 215 aa20■□□□□ 0.79
LMNA-208ENST00000448611 ENOX1Q8TC92 643 aaKnown RBP20■□□□□ 0.79
LMNA-208ENST00000448611 MED15Q96RN5 788 aa20■□□□□ 0.79
LMNA-208ENST00000448611 MMTAG2Q9BU76 263 aaKnown RBP20■□□□□ 0.79
LMNA-208ENST00000448611 BLZF1Q9H2G9 400 aa20■□□□□ 0.79
LMNA-208ENST00000448611 ASTN2O75129 1339 aaPredicted RBP19.99■□□□□ 0.79
LMNA-208ENST00000448611 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 ATP1A3P13637 1013 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 TXKP42681 527 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 CCDC144BQ3MJ40 725 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 LRRC15Q8TF66 581 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 GLIS2Q9BZE0 524 aaPredicted RBP19.99■□□□□ 0.79
LMNA-208ENST00000448611 SH2D4AQ9H788 454 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 FANCLQ9NW38 375 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 RNF181Q9P0P0 153 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 IFNKQ9P0W0 207 aa19.99■□□□□ 0.79
LMNA-208ENST00000448611 GCFC2P16383 781 aaKnown RBP19.98■□□□□ 0.79
LMNA-208ENST00000448611 AP3B2Q13367 1082 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 USH1GQ495M9 461 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 TBC1D10BQ4KMP7 808 aaPredicted RBP19.98■□□□□ 0.79
LMNA-208ENST00000448611 RASSF8Q8NHQ8 419 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 P2RX7Q99572 595 aaKnown RBP19.98■□□□□ 0.79
LMNA-208ENST00000448611 ANO3Q9BYT9 981 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 XPO4Q9C0E2 1151 aaKnown RBP19.98■□□□□ 0.79
LMNA-208ENST00000448611 KBTBD4Q9NVX7 518 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 HACL1Q9UJ83 578 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 SBF1O95248 1867 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 MYH7BA7E2Y1 1941 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 FANCCQ00597 558 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 KIF4BQ2VIQ3 1234 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 NAP1L4Q99733 375 aaKnown RBP19.98■□□□□ 0.79
LMNA-208ENST00000448611 CUEDC2Q9H467 287 aa19.98■□□□□ 0.79
LMNA-208ENST00000448611 DDX25Q9UHL0 483 aaKnown RBP19.98■□□□□ 0.79
LMNA-208ENST00000448611 OPLAHO14841 1288 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 PLA2G6O60733 806 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
LMNA-208ENST00000448611 PLCG1P19174 1290 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 C9orf131Q5VYM1 1079 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 MCTP2Q6DN12 878 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 CCDC84Q86UT8 332 aaPredicted RBP19.97■□□□□ 0.79
LMNA-208ENST00000448611 CRYGNQ8WXF5 182 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 HAS1Q92839 578 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 PLIN2Q99541 437 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 MAGEF1Q9HAY2 307 aa19.97■□□□□ 0.79
LMNA-208ENST00000448611 MYL1P05976 194 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 USP11P51784 963 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 PDIA5Q14554 519 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 ZYXQ15942 572 aaKnown RBP19.96■□□□□ 0.79
LMNA-208ENST00000448611 TMEM266Q2M3C6 531 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 TRMT44Q8IYL2 757 aaKnown RBP19.96■□□□□ 0.79
LMNA-208ENST00000448611 LRWD1Q9UFC0 647 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 NFE2L3Q9Y4A8 694 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 PPP1R3GB7ZBB8 358 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 RPN1P04843 607 aaKnown RBP19.96■□□□□ 0.79
LMNA-208ENST00000448611 ZNF18P17022 549 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 TAL1P17542 331 aaPredicted RBP19.96■□□□□ 0.79
LMNA-208ENST00000448611 CHURC1Q8WUH1 139 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 MBOAT7Q96N66 472 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 DEFB129Q9H1M3 183 aa19.96■□□□□ 0.79
LMNA-208ENST00000448611 RANBP17Q9H2T7 1088 aaKnown RBP19.96■□□□□ 0.79
LMNA-208ENST00000448611 ATAD5Q96QE3 1844 aa19.95■□□□□ 0.78
LMNA-208ENST00000448611 CYP3A7-CYP3A51PA0A087WV96 503 aa19.95■□□□□ 0.78
LMNA-208ENST00000448611 CYP3A7P24462 503 aa19.95■□□□□ 0.78
LMNA-208ENST00000448611 SMYD4Q8IYR2 804 aaPredicted RBP19.95■□□□□ 0.78
LMNA-208ENST00000448611 RMND1Q9NWS8 449 aa19.95■□□□□ 0.78
LMNA-208ENST00000448611 TRAF1Q13077 416 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 MOXD1Q6UVY6 613 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 FAM160B2Q86V87 743 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 RAB34Q9BZG1 259 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 GINM1Q9NU53 330 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 PIK3CDO00329 1044 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 FOSP01100 380 aaPredicted RBP19.94■□□□□ 0.78
LMNA-208ENST00000448611 ARHGAP4P98171 946 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 ZNF658Q5TYW1 1059 aaPredicted RBP19.94■□□□□ 0.78
LMNA-208ENST00000448611 TEX2Q8IWB9 1127 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 ZNF341Q9BYN7 854 aa19.94■□□□□ 0.78
LMNA-208ENST00000448611 DICER1Q9UPY3 1922 aaKnown RBP19.93■□□□□ 0.78
LMNA-208ENST00000448611 POTEMA6NI47 508 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 KLRC4O43908 158 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 CTNND1O60716 968 aaKnown RBP19.93■□□□□ 0.78
LMNA-208ENST00000448611 GRB10Q13322 594 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 KCNB1Q14721 858 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 CACTINQ8WUQ7 758 aaKnown RBP19.93■□□□□ 0.78
LMNA-208ENST00000448611 KIFC2Q96AC6 838 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 CALML4Q96GE6 196 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 PNMA5Q96PV4 448 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 IMPACTQ9P2X3 320 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 FEM1BQ9UK73 627 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 PYCARDQ9ULZ3 195 aa19.93■□□□□ 0.78
LMNA-208ENST00000448611 SYNRGQ9UMZ2 1314 aa19.92■□□□□ 0.78
LMNA-208ENST00000448611 SERPINC1P01008 464 aa19.92■□□□□ 0.78
LMNA-208ENST00000448611 SREBF1P36956 1147 aa19.92■□□□□ 0.78
LMNA-208ENST00000448611 UBASH3AP57075 661 aa19.92■□□□□ 0.78
LMNA-208ENST00000448611 LRMPQ12912 555 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms