RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 MFSD6Q6ZSS7 791 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 RILPL2Q969X0 211 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 TTC14Q96N46 770 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
TRA2A-203ENST00000448549 WDR11Q9BZH6 1224 aa18.28■□□□□ 0.52
TRA2A-203ENST00000448549 CXXC1Q9P0U4 656 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-203ENST00000448549 ZMYM6O95789 1325 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 FGBP02675 491 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 ZNF543Q08ER8 600 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 RNF207Q6ZRF8 634 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 TBC1D10CQ8IV04 446 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 HERVK_113Q902F9 699 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 SEZ6LQ9BYH1 1024 aa18.27■□□□□ 0.52
TRA2A-203ENST00000448549 EYSQ5T1H1 3165 aa18.26■□□□□ 0.51
TRA2A-203ENST00000448549 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
TRA2A-203ENST00000448549 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
TRA2A-203ENST00000448549 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
TRA2A-203ENST00000448549 WNT8AQ9H1J5 351 aa18.26■□□□□ 0.51
TRA2A-203ENST00000448549 ALDH8A1Q9H2A2 487 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-203ENST00000448549 MCM3APO60318 1980 aa18.26■□□□□ 0.51
TRA2A-203ENST00000448549 LOC102724159A0A0B4J2E5 919 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 RBM47A0AV96 593 aaKnown RBP18.25■□□□□ 0.51
TRA2A-203ENST00000448549 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 PCP11498 1178 aaKnown RBP18.25■□□□□ 0.51
TRA2A-203ENST00000448549 SDSP20132 328 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 RPS6P62753 249 aaKnown RBP18.25■□□□□ 0.51
TRA2A-203ENST00000448549 PDE4DQ08499 809 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 PWP2Q15269 919 aaKnown RBP18.25■□□□□ 0.51
TRA2A-203ENST00000448549 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 PRDM12Q9H4Q4 367 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 POLR3EQ9NVU0 708 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
TRA2A-203ENST00000448549 MYL3P08590 195 aa18.24■□□□□ 0.51
TRA2A-203ENST00000448549 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
TRA2A-203ENST00000448549 CPT1AP50416 773 aa18.24■□□□□ 0.51
TRA2A-203ENST00000448549 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
TRA2A-203ENST00000448549 OR6J1Q8NGC5 347 aa18.24■□□□□ 0.51
TRA2A-203ENST00000448549 ESR2Q92731 530 aa18.24■□□□□ 0.51
TRA2A-203ENST00000448549 MTIF3Q9H2K0 278 aaKnown RBP18.24■□□□□ 0.51
TRA2A-203ENST00000448549 RNF41Q9H4P4 317 aaPredicted RBP18.24■□□□□ 0.51
TRA2A-203ENST00000448549 TRMT13Q9NUP7 481 aaKnown RBP18.24■□□□□ 0.51
TRA2A-203ENST00000448549 MSRAQ9UJ68 235 aa18.24■□□□□ 0.51
TRA2A-203ENST00000448549 NEDD4P46934 1319 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 ZNF213O14771 459 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 CYP2C9P11712 490 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
TRA2A-203ENST00000448549 RAB30Q15771 203 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 USH1GQ495M9 461 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 SMC5Q8IY18 1101 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 PPM1EQ8WY54 764 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 SCLYQ96I15 445 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 GAS2L1Q99501 681 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-203ENST00000448549 UBA5Q9GZZ9 404 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 CPVLQ9H3G5 476 aa18.23■□□□□ 0.51
TRA2A-203ENST00000448549 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-203ENST00000448549 SUPT20HL2P0C7V6 817 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 EDNRBP24530 442 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 PPP2R5BQ15173 497 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 GPATCH4Q5T3I0 446 aaKnown RBP18.22■□□□□ 0.51
TRA2A-203ENST00000448549 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 PLEKHM2Q8IWE5 1019 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 RPUSD2Q8IZ73 545 aaKnown RBP18.22■□□□□ 0.51
TRA2A-203ENST00000448549 DNERQ8NFT8 737 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 PPP1R13LQ8WUF5 828 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 VWCEQ96DN2 955 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 MPHOSPH6Q99547 160 aaKnown RBP18.22■□□□□ 0.51
TRA2A-203ENST00000448549 MTG1Q9BT17 334 aaPredicted RBP18.22■□□□□ 0.51
TRA2A-203ENST00000448549 NKX2-4Q9H2Z4 354 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
TRA2A-203ENST00000448549 YBX2Q9Y2T7 364 aaKnown RBP18.22■□□□□ 0.51
TRA2A-203ENST00000448549 LRRC37A2A6NM11 1700 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 TNKSO95271 1327 aa18.22■□□□□ 0.51
TRA2A-203ENST00000448549 VCANP13611 3396 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 FAM47CQ5HY64 1035 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 CWC27Q6UX04 472 aaKnown RBP18.21■□□□□ 0.51
TRA2A-203ENST00000448549 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 SCFD2Q8WU76 684 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 COPS5Q92905 334 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 SLC28A3Q9HAS3 691 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 PRDM6Q9NQX0 595 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 SLC4A7Q9Y6M7 1214 aa18.21■□□□□ 0.51
TRA2A-203ENST00000448549 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.51e-12■■□□□ 11.7
TRA2A-203ENST00000448549 KDM4AO75164 1064 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 IGHDP01880 384 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 TXNP10599 105 aaKnown RBP18.2■□□□□ 0.5
TRA2A-203ENST00000448549 RABGGTBP53611 331 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 ADGRE1Q14246 886 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 NBPF20Q3BBV1 942 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 BRDTQ58F21 947 aaPredicted RBP18.2■□□□□ 0.5
TRA2A-203ENST00000448549 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
TRA2A-203ENST00000448549 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
TRA2A-203ENST00000448549 A6NJR5 290 aa18.19■□□□□ 0.5
TRA2A-203ENST00000448549 ZBBXA8MT70 800 aa18.19■□□□□ 0.5
TRA2A-203ENST00000448549 B4DLN1 442 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms