RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GOLGA8HP0CJ92 632 aa33.22■■■□□ 2.91
CBX4-202ENST00000448310 PPIGQ13427 754 aaKnown RBP eCLIP33.22■■■□□ 2.914e-11■■□□□ 13.5
CBX4-202ENST00000448310 ITGA7Q13683 1181 aa33.22■■■□□ 2.91
CBX4-202ENST00000448310 SLC43A3Q8NBI5 491 aa33.22■■■□□ 2.91
CBX4-202ENST00000448310 CPVLQ9H3G5 476 aa33.22■■■□□ 2.91
CBX4-202ENST00000448310 CABYRO75952 493 aa33.21■■■□□ 2.91
CBX4-202ENST00000448310 CYP2C18P33260 490 aa33.21■■■□□ 2.91
CBX4-202ENST00000448310 PSMC6P62333 389 aa33.21■■■□□ 2.91
CBX4-202ENST00000448310 Q9Y3F1 56 aa33.21■■■□□ 2.91
CBX4-202ENST00000448310 EYSQ5T1H1 3165 aa33.2■■■□□ 2.91
CBX4-202ENST00000448310 ZEB2O60315 1214 aa33.2■■■□□ 2.91
CBX4-202ENST00000448310 ACRP10323 421 aa33.2■■■□□ 2.91
CBX4-202ENST00000448310 TMEM240Q5SV17 173 aa33.2■■■□□ 2.91
CBX4-202ENST00000448310 RNF207Q6ZRF8 634 aa33.2■■■□□ 2.91
CBX4-202ENST00000448310 TMEM199Q8N511 208 aa33.2■■■□□ 2.91
CBX4-202ENST00000448310 HSFX4A0A1B0GTS1 333 aaPredicted RBP33.19■■■□□ 2.9
CBX4-202ENST00000448310 HSFX3A0A1B0GWH4 333 aaPredicted RBP33.19■■■□□ 2.9
CBX4-202ENST00000448310 KDM4AO75164 1064 aa33.19■■■□□ 2.9
CBX4-202ENST00000448310 DUSP28Q4G0W2 176 aa33.19■■■□□ 2.9
CBX4-202ENST00000448310 PHF6Q8IWS0 365 aaKnown RBP eCLIP33.19■■■□□ 2.9
CBX4-202ENST00000448310 WDR11Q9BZH6 1224 aa33.19■■■□□ 2.9
CBX4-202ENST00000448310 UBA5Q9GZZ9 404 aa33.19■■■□□ 2.9
CBX4-202ENST00000448310 RPS6P62753 249 aaKnown RBP33.18■■■□□ 2.9
CBX4-202ENST00000448310 UMODL1Q5DID0 1318 aa33.18■■■□□ 2.9
CBX4-202ENST00000448310 WDR19Q8NEZ3 1342 aa33.18■■■□□ 2.9
CBX4-202ENST00000448310 MYH6P13533 1939 aa33.18■■■□□ 2.9
CBX4-202ENST00000448310 DNAJB2P25686 324 aa33.17■■■□□ 2.9
CBX4-202ENST00000448310 USH1GQ495M9 461 aa33.17■■■□□ 2.9
CBX4-202ENST00000448310 ZNF365Q70YC5 407 aa33.17■■■□□ 2.9
CBX4-202ENST00000448310 DGKHQ86XP1 1220 aa33.17■■■□□ 2.9
CBX4-202ENST00000448310 MAFAQ8NHW3 353 aaPredicted RBP33.17■■■□□ 2.9
CBX4-202ENST00000448310 TRPV6Q9H1D0 765 aa33.17■■■□□ 2.9
CBX4-202ENST00000448310 B4E1Z4 1266 aa33.16■■■□□ 2.9
CBX4-202ENST00000448310 GPATCH4Q5T3I0 446 aaKnown RBP33.16■■■□□ 2.9
CBX4-202ENST00000448310 PNMA1Q8ND90 353 aa33.16■■■□□ 2.9
CBX4-202ENST00000448310 HIPK3Q9H422 1215 aa33.16■■■□□ 2.9
CBX4-202ENST00000448310 PNMA2Q9UL42 364 aa33.16■■■□□ 2.9
CBX4-202ENST00000448310 TMEM265A0A087WTH1 108 aa33.15■■■□□ 2.9
CBX4-202ENST00000448310 LOC102724159A0A0B4J2E5 919 aa33.15■■■□□ 2.9
CBX4-202ENST00000448310 GRXCR1A8MXD5 290 aa33.15■■■□□ 2.9
CBX4-202ENST00000448310 B4GALT4O60513 344 aa33.15■■■□□ 2.9
CBX4-202ENST00000448310 PWP2Q15269 919 aaKnown RBP33.15■■■□□ 2.9
CBX4-202ENST00000448310 IQCA1Q86XH1 822 aa33.15■■■□□ 2.9
CBX4-202ENST00000448310 RBM47A0AV96 593 aaKnown RBP33.14■■■□□ 2.9
CBX4-202ENST00000448310 HIP1O00291 1037 aa33.14■■■□□ 2.9
CBX4-202ENST00000448310 FOSL2P15408 326 aa33.14■■■□□ 2.9
CBX4-202ENST00000448310 PDE4DQ08499 809 aa33.14■■■□□ 2.9
CBX4-202ENST00000448310 RASIP1Q5U651 963 aa33.14■■■□□ 2.9
CBX4-202ENST00000448310 KAT14Q9H8E8 782 aa33.14■■■□□ 2.9
CBX4-202ENST00000448310 PSRC1Q6PGN9 363 aaPredicted RBP33.13■■■□□ 2.89
CBX4-202ENST00000448310 OR6J1Q8NGC5 347 aa33.13■■■□□ 2.89
CBX4-202ENST00000448310 ZSCAN10Q96SZ4 725 aaPredicted RBP33.13■■■□□ 2.89
CBX4-202ENST00000448310 DSCC1Q9BVC3 393 aa33.13■■■□□ 2.89
CBX4-202ENST00000448310 IL23AQ9NPF7 189 aa33.13■■■□□ 2.89
CBX4-202ENST00000448310 GBF1Q92538 1859 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 MYL3P08590 195 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 PBX2P40425 430 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 CCL23P55773 120 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 GRIN2CQ14957 1233 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 CDC37Q16543 378 aaPredicted RBP33.12■■■□□ 2.89
CBX4-202ENST00000448310 TIFAQ96CG3 184 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 NOC4LQ9BVI4 516 aaKnown RBP33.12■■■□□ 2.89
CBX4-202ENST00000448310 IL25Q9H293 177 aa33.12■■■□□ 2.89
CBX4-202ENST00000448310 EDNRBP24530 442 aa33.11■■■□□ 2.89
CBX4-202ENST00000448310 IMMTQ16891 758 aaKnown RBP33.11■■■□□ 2.89
CBX4-202ENST00000448310 CCDC178Q5BJE1 867 aa33.11■■■□□ 2.89
CBX4-202ENST00000448310 ENAHQ8N8S7 591 aaPredicted RBP33.11■■■□□ 2.89
CBX4-202ENST00000448310 ANKS1AQ92625 1134 aa33.11■■■□□ 2.89
CBX4-202ENST00000448310 POLR3EQ9NVU0 708 aa33.11■■■□□ 2.89
CBX4-202ENST00000448310 ZSWIM5Q9P217 1185 aa33.11■■■□□ 2.89
CBX4-202ENST00000448310 MYO9BQ13459 2157 aa33.11■■■□□ 2.89
CBX4-202ENST00000448310 PURAQ00577 322 aaKnown RBP33.1■■■□□ 2.89
CBX4-202ENST00000448310 ADGRF4Q8IZF3 695 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 DNERQ8NFT8 737 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 TBC1D5Q92609 795 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 COPS5Q92905 334 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 MPHOSPH6Q99547 160 aaKnown RBP33.1■■■□□ 2.89
CBX4-202ENST00000448310 SEZ6LQ9BYH1 1024 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 PBX4Q9BYU1 374 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 WNT8AQ9H1J5 351 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 ALDH8A1Q9H2A2 487 aaPredicted RBP33.1■■■□□ 2.89
CBX4-202ENST00000448310 PRUNE2Q8WUY3 3088 aa33.1■■■□□ 2.89
CBX4-202ENST00000448310 TNKSO95271 1327 aa33.09■■■□□ 2.89
CBX4-202ENST00000448310 SCN10AQ9Y5Y9 1956 aa33.09■■■□□ 2.89
CBX4-202ENST00000448310 CPT1AP50416 773 aa33.09■■■□□ 2.89
CBX4-202ENST00000448310 PPP2R5BQ15173 497 aa33.09■■■□□ 2.89
CBX4-202ENST00000448310 COL25A1Q9BXS0 654 aaPredicted RBP33.09■■■□□ 2.89
CBX4-202ENST00000448310 ZNF576Q9H609 170 aa33.09■■■□□ 2.89
CBX4-202ENST00000448310 TRMT13Q9NUP7 481 aaKnown RBP33.09■■■□□ 2.89
CBX4-202ENST00000448310 CXXC1Q9P0U4 656 aaPredicted RBP33.09■■■□□ 2.89
CBX4-202ENST00000448310 NT5C2P49902 561 aa33.08■■■□□ 2.89
CBX4-202ENST00000448310 PPP1R13LQ8WUF5 828 aa33.08■■■□□ 2.89
CBX4-202ENST00000448310 ASPRV1Q53RT3 343 aa33.07■■■□□ 2.88
CBX4-202ENST00000448310 SCFD2Q8WU76 684 aa33.07■■■□□ 2.88
CBX4-202ENST00000448310 HERVK_113Q902F9 699 aa33.07■■■□□ 2.88
CBX4-202ENST00000448310 CTNNA3Q9UI47 895 aa33.07■■■□□ 2.88
CBX4-202ENST00000448310 ABCB11O95342 1321 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 SCN5AQ14524 2016 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 DHX16O60231 1041 aaKnown RBP33.06■■■□□ 2.88
CBX4-202ENST00000448310 FGBP02675 491 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms