RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 BNC1Q01954 994 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RBM20Q5T481 1227 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 BTNL9Q6UXG8 535 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 C11orf74Q86VG3 221 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 VSTM4Q8IW00 320 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SPATA5Q8NB90 893 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SCFD1Q8WVM8 642 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 NDNQ99608 321 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 IL1RAPL2Q9NP60 686 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 DISC1Q9NRI5 854 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 HAUS2Q9NVX0 235 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MAP3K15Q6ZN16 1313 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FAM177BA6PVY3 158 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 A8MXQ7 604 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PIK3CDO00329 1044 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 RAPGEF3O95398 923 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 MYL1P05976 194 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ALOX5P09917 674 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 MDH1P40925 334 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCT8P50990 548 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PHEXP78562 749 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CDR2Q01850 454 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TRAP1Q12931 704 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 C10orf76Q5T2E6 689 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FYB2Q5VWT5 728 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SND1Q7KZF4 910 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CKAP2LQ8IYA6 745 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 USP28Q96RU2 1077 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 MTRQ99707 1265 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 EDEM3Q9BZQ6 932 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TPCN1Q9ULQ1 816 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ZMYND8Q9ULU4 1186 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 PHF24Q9UPV7 400 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ATP11BQ9Y2G3 1177 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PCDHGC5Q9Y5F6 944 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 RPS6KL1Q9Y6S9 549 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 MYH8P13535 1937 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CDHR2Q9BYE9 1310 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 BAIAP3O94812 1187 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 GRIN1Q05586 938 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 STK3Q13188 491 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PPP6R3Q5H9R7 873 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 TCHHL1Q5QJ38 904 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCNI2Q6ZMN8 369 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 HEATR3Q7Z4Q2 680 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CRACR2BQ8N4Y2 399 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 NRBF2Q96F24 287 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ANKRD36BP1Q96IX9 119 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ACAP3Q96P50 834 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ALDH8A1Q9H2A2 487 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 FAM96AQ9H5X1 160 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CHIC2Q9UKJ5 165 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 HYOU1Q9Y4L1 999 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PFKFB2O60825 505 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 OATP04181 439 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 COG7P83436 770 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCZ1BP86790 482 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCZ1P86791 482 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CBX3Q13185 183 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CLPPQ16740 277 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 RWDD4Q6NW29 188 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 SLF2Q8IX21 1173 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 KRI1Q8N9T8 703 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 MINDY2Q8NBR6 621 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 RBBP8NLQ8NC74 664 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 ZNF473Q8WTR7 871 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 MCUR1Q96AQ8 359 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCDC42Q96M95 316 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 HAUS7Q99871 368 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SLF1Q9BQI6 1058 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TIPINQ9BVW5 301 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PARVGQ9HBI0 331 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TRIM39Q9HCM9 518 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 EMC3Q9P0I2 261 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SCTRP47872 440 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 UBE4AQ14139 1066 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ANKRD20A2Q5SQ80 823 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ANKRD20A1Q5TYW2 823 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ANKRD20A3Q5VUR7 823 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SYCP3Q8IZU3 236 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CSGALNACT2Q8N6G5 542 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ATL1Q8WXF7 558 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 GIN1Q9NXP7 522 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SENP1Q9P0U3 644 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 STK38LQ9Y2H1 464 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 KDM2AQ9Y2K7 1162 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 RWDD3Q9Y3V2 267 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 GRID2IPA4D2P6 1211 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FAM25AB3EWG3 89 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FAM25CB3EWG5 89 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FAM25GB3EWG6 89 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ADCY3O60266 1144 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SMNDC1O75940 238 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-203ENST00000447540 SDSP20132 328 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 KRT76Q01546 638 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ASPHQ12797 758 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ARHGEF6Q15052 776 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 VWA3BQ502W6 1294 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 E4F1Q66K89 784 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 ANO5Q75V66 913 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms