RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 NAPAP54920 295 aa13.95□□□□□ -0.18
DDR1-238ENST00000446312 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
DDR1-238ENST00000446312 ALX1Q15699 326 aa13.95□□□□□ -0.18
DDR1-238ENST00000446312 MSANTD4Q8NCY6 345 aa13.95□□□□□ -0.18
DDR1-238ENST00000446312 DISC1Q9NRI5 854 aa13.95□□□□□ -0.18
DDR1-238ENST00000446312 POTEMA6NI47 508 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 RNF187Q5TA31 235 aaPredicted RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 TSEN2Q8NCE0 465 aaKnown RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 RIOK1Q9BRS2 568 aaKnown RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 LIMA1Q9UHB6 759 aaKnown RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 NEBLO76041 1014 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 SPTY2D1Q68D10 685 aaPredicted RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 CABP7Q86V35 215 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 COA7Q96BR5 231 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 DCP1AQ9NPI6 582 aaPredicted RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 RAB21Q9UL25 225 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 RTL9Q8NET4 1388 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 ATP8B1O43520 1251 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 TRAPPC11Q7Z392 1133 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 OR2W6PQ8NHA6 318 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 FAM76AQ8TAV0 307 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 FAM84BQ96KN1 310 aaPredicted RBP13.94□□□□□ -0.18
DDR1-238ENST00000446312 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
DDR1-238ENST00000446312 LGALS16A8MUM7 142 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 TSPY3P0CV98 308 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 TSPY8P0CW00 308 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 GNAT2P19087 354 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 NOC3LQ8WTT2 800 aaKnown RBP13.93□□□□□ -0.18
DDR1-238ENST00000446312 TRIM31Q9BZY9 425 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 RBM28Q9NW13 759 aaKnown RBP13.93□□□□□ -0.18
DDR1-238ENST00000446312 NFU1Q9UMS0 254 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 HYOU1Q9Y4L1 999 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 HLTFQ14527 1009 aaKnown RBP eCLIP13.93□□□□□ -0.18
DDR1-238ENST00000446312 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 MYH13Q9UKX3 1938 aa13.93□□□□□ -0.18
DDR1-238ENST00000446312 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 PPP1R12AO14974 1030 aaPredicted RBP13.92□□□□□ -0.18
DDR1-238ENST00000446312 FAM153BP0C7A2 387 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
DDR1-238ENST00000446312 SEC24CP53992 1094 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 GUCY1A3Q02108 690 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 FAM153CQ494X1 144 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 SLC30A10Q6XR72 485 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 PTF1AQ7RTS3 328 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
DDR1-238ENST00000446312 FAM153AQ9UHL3 310 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 TAL1P17542 331 aaPredicted RBP13.92□□□□□ -0.18
DDR1-238ENST00000446312 SCP2P22307 547 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 GUCY2DQ02846 1103 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 PICALMQ13492 652 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 ITPK1Q13572 414 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 NAA35Q5VZE5 725 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDR1-238ENST00000446312 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 HAUS4Q9H6D7 363 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 ANKIB1Q9P2G1 1089 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 NPHP3-ACAD11A0A0J9YXS1 232 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 LRRC53A6NM62 1247 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 SLC1A4P43007 532 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 MAGEA1P43355 309 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 SPAG1Q07617 926 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 MMS22LQ6ZRQ5 1243 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 RBM12Q9NTZ6 932 aaKnown RBP13.92□□□□□ -0.18
DDR1-238ENST00000446312 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
DDR1-238ENST00000446312 AGPSO00116 658 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 CYTH3O43739 400 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 IVLP07476 585 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 TNNI2P48788 182 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 CARSP49589 748 aaKnown RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 EHHADHQ08426 723 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 SH3RF3Q8TEJ3 882 aaPredicted RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 TCP11L1Q9NUJ3 509 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 BAZ2AQ9UIF9 1905 aaKnown RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 H7C1D1 291 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 ZNF34Q8IZ26 560 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 LRRC47Q8N1G4 583 aaKnown RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 UHMK1Q8TAS1 419 aaKnown RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 TNFRSF25Q93038 417 aa13.91□□□□□ -0.18
DDR1-238ENST00000446312 CCDC43Q96MW1 224 aaKnown RBP13.91□□□□□ -0.18
DDR1-238ENST00000446312 TMCO5BA8MYB1 307 aa13.9□□□□□ -0.18
DDR1-238ENST00000446312 UBE2SQ16763 222 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms