RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 FOSL2P15408 326 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 MFAP1P55081 439 aaKnown RBP18.15■□□□□ 0.5
SEC13-213ENST00000445064 GRIN2CQ14957 1233 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 SLC30A10Q6XR72 485 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 CHD1LQ86WJ1 897 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 WDR11Q9BZH6 1224 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 TRPV6Q9H1D0 765 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 UMODL1Q5DID0 1318 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 LRRC37A2A6NM11 1700 aa18.15■□□□□ 0.5
SEC13-213ENST00000445064 B4GALT4O60513 344 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 GOLGA8HP0CJ92 632 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 PCP11498 1178 aaKnown RBP18.14■□□□□ 0.49
SEC13-213ENST00000445064 AAMPQ13685 434 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 DUSP28Q4G0W2 176 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
SEC13-213ENST00000445064 RNF207Q6ZRF8 634 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 ESR2Q92731 530 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 UBA5Q9GZZ9 404 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 CPVLQ9H3G5 476 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 HIPK3Q9H422 1215 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 RNF41Q9H4P4 317 aaPredicted RBP18.14■□□□□ 0.49
SEC13-213ENST00000445064 ZNF576Q9H609 170 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 NEDD4P46934 1319 aa18.14■□□□□ 0.49
SEC13-213ENST00000445064 PBX2P40425 430 aa18.13■□□□□ 0.49
SEC13-213ENST00000445064 CCL23P55773 120 aa18.13■□□□□ 0.49
SEC13-213ENST00000445064 NUCB1Q02818 461 aa18.13■□□□□ 0.49
SEC13-213ENST00000445064 RASIP1Q5U651 963 aa18.13■□□□□ 0.49
SEC13-213ENST00000445064 TIFAQ96CG3 184 aa18.13■□□□□ 0.49
SEC13-213ENST00000445064 OSBPL3Q9H4L5 887 aa18.13■□□□□ 0.49
SEC13-213ENST00000445064 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
SEC13-213ENST00000445064 FGBP02675 491 aa18.12■□□□□ 0.49
SEC13-213ENST00000445064 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
SEC13-213ENST00000445064 USH1GQ495M9 461 aa18.12■□□□□ 0.49
SEC13-213ENST00000445064 PSRC1Q6PGN9 363 aaPredicted RBP18.12■□□□□ 0.49
SEC13-213ENST00000445064 DGKHQ86XP1 1220 aa18.12■□□□□ 0.49
SEC13-213ENST00000445064 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
SEC13-213ENST00000445064 PBX4Q9BYU1 374 aa18.12■□□□□ 0.49
SEC13-213ENST00000445064 PNMA2Q9UL42 364 aa18.12■□□□□ 0.49
SEC13-213ENST00000445064 A0A0C4DFX4 3053 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 KDM4AO75164 1064 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 MYL3P08590 195 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 PDE4DQ08499 809 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
SEC13-213ENST00000445064 GPATCH4Q5T3I0 446 aaKnown RBP18.11■□□□□ 0.49
SEC13-213ENST00000445064 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 NOC4LQ9BVI4 516 aaKnown RBP18.11■□□□□ 0.49
SEC13-213ENST00000445064 SEZ6LQ9BYH1 1024 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 DIAPH3Q9NSV4 1193 aa18.11■□□□□ 0.49
SEC13-213ENST00000445064 CXXC1Q9P0U4 656 aaPredicted RBP18.11■□□□□ 0.49
SEC13-213ENST00000445064 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 B4E1Z4 1266 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 PURAQ00577 322 aaKnown RBP18.1■□□□□ 0.49
SEC13-213ENST00000445064 OTOP2Q7RTS6 562 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 PNMA1Q8ND90 353 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 HERVK_113Q902F9 699 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 TBC1D5Q92609 795 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 COPS5Q92905 334 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 WNT8AQ9H1J5 351 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
SEC13-213ENST00000445064 POLR3EQ9NVU0 708 aa18.1■□□□□ 0.49
SEC13-213ENST00000445064 CPT1AP50416 773 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 IQCA1Q86XH1 822 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 DNERQ8NFT8 737 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 PPP1R13LQ8WUF5 828 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 SCLYQ96I15 445 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 MPHOSPH6Q99547 160 aaKnown RBP18.09■□□□□ 0.49
SEC13-213ENST00000445064 KAT14Q9H8E8 782 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
SEC13-213ENST00000445064 TRMT13Q9NUP7 481 aaKnown RBP18.09■□□□□ 0.49
SEC13-213ENST00000445064 ZSWIM5Q9P217 1185 aa18.09■□□□□ 0.49
SEC13-213ENST00000445064 TXNP10599 105 aaKnown RBP18.08■□□□□ 0.48
SEC13-213ENST00000445064 CYP2C9P11712 490 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 EDNRBP24530 442 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 PPP2R5BQ15173 497 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 CCDC178Q5BJE1 867 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 ANKS1AQ92625 1134 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 ZSCAN10Q96SZ4 725 aaPredicted RBP18.08■□□□□ 0.48
SEC13-213ENST00000445064 MTG1Q9BT17 334 aaPredicted RBP18.08■□□□□ 0.48
SEC13-213ENST00000445064 VAT1LQ9HCJ6 419 aa18.08■□□□□ 0.48
SEC13-213ENST00000445064 B4DLN1 442 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 HIP1O00291 1037 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 SUPT20HL2P0C7V6 817 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
SEC13-213ENST00000445064 CDC37Q16543 378 aaPredicted RBP18.07■□□□□ 0.48
SEC13-213ENST00000445064 NBPF20Q3BBV1 942 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 RPUSD2Q8IZ73 545 aaKnown RBP18.07■□□□□ 0.48
SEC13-213ENST00000445064 RGS22Q8NE09 1264 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 TAAR1Q96RJ0 339 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 PRDM12Q9H4Q4 367 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 MSRAQ9UJ68 235 aa18.07■□□□□ 0.48
SEC13-213ENST00000445064 TNKSO95271 1327 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.48
SEC13-213ENST00000445064 ARIH2O95376 493 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms