RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 NAA25Q14CX7 972 aa8.79□□□□□ -1
RIF1-205ENST00000444746 PRAMEF18Q5VWM3 479 aa8.79□□□□□ -1
RIF1-205ENST00000444746 TTBK2Q6IQ55 1244 aa8.79□□□□□ -1
RIF1-205ENST00000444746 UBL4BQ8N7F7 174 aa8.79□□□□□ -1
RIF1-205ENST00000444746 BANK1Q8NDB2 785 aa8.79□□□□□ -1
RIF1-205ENST00000444746 HOOK2Q96ED9 719 aa8.79□□□□□ -1
RIF1-205ENST00000444746 TUBGCP2Q9BSJ2 902 aa8.79□□□□□ -1
RIF1-205ENST00000444746 RAVER2Q9HCJ3 691 aaKnown RBP8.79□□□□□ -1
RIF1-205ENST00000444746 SAR1BQ9Y6B6 198 aa8.79□□□□□ -1
RIF1-205ENST00000444746 ARAP3Q8WWN8 1544 aa8.79□□□□□ -1
RIF1-205ENST00000444746 TTC37Q6PGP7 1564 aa8.79□□□□□ -1
RIF1-205ENST00000444746 ANKRD65E5RJM6 399 aa8.79□□□□□ -1
RIF1-205ENST00000444746 HMGB2P26583 209 aaKnown RBP8.79□□□□□ -1
RIF1-205ENST00000444746 C6orf163Q5TEZ5 329 aa8.79□□□□□ -1
RIF1-205ENST00000444746 SPATA1Q5VX52 437 aa8.79□□□□□ -1
RIF1-205ENST00000444746 GSPT2Q8IYD1 628 aaKnown RBP8.79□□□□□ -1
RIF1-205ENST00000444746 HPS3Q969F9 1004 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L15C9J2P7 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L13C9JLJ4 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L11C9JVI0 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L18D6R9N7 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L22D6RA61 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L17D6RBQ6 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L19D6RCP7 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L20D6RJB6 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 CIAO1O76071 339 aa8.79□□□□□ -1
RIF1-205ENST00000444746 GNGT1P63211 74 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L24Q0WX57 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L6PQ6QN14 398 aa8.79□□□□□ -1
RIF1-205ENST00000444746 CCDC84Q86UT8 332 aaPredicted RBP8.79□□□□□ -1
RIF1-205ENST00000444746 IL25Q9H293 177 aa8.79□□□□□ -1
RIF1-205ENST00000444746 NKIRAS1Q9NYS0 192 aa8.79□□□□□ -1
RIF1-205ENST00000444746 ARMCX3Q9UH62 379 aaPredicted RBP8.79□□□□□ -1
RIF1-205ENST00000444746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.79□□□□□ -1
RIF1-205ENST00000444746 PBRM1Q86U86 1689 aa8.79□□□□□ -1
RIF1-205ENST00000444746 KRT71Q3SY84 523 aa8.79□□□□□ -1
RIF1-205ENST00000444746 KMT5BQ4FZB7 885 aa8.79□□□□□ -1
RIF1-205ENST00000444746 NUP58Q9BVL2 599 aa8.79□□□□□ -1
RIF1-205ENST00000444746 ZNF277Q9NRM2 450 aaPredicted RBP8.79□□□□□ -1
RIF1-205ENST00000444746 KIF24Q5T7B8 1368 aa8.79□□□□□ -1
RIF1-205ENST00000444746 PALLDQ8WX93 1383 aa8.79□□□□□ -1
RIF1-205ENST00000444746 USP17L10C9JJH3 530 aa8.79□□□□□ -1
RIF1-205ENST00000444746 PLCG1P19174 1290 aa8.79□□□□□ -1
RIF1-205ENST00000444746 PIK3CAP42336 1068 aa8.79□□□□□ -1
RIF1-205ENST00000444746 FOXD4Q12950 439 aaPredicted RBP8.79□□□□□ -1
RIF1-205ENST00000444746 VWA3BQ502W6 1294 aa8.79□□□□□ -1
RIF1-205ENST00000444746 ZNF394Q53GI3 561 aa8.79□□□□□ -1
RIF1-205ENST00000444746 POMGNT1Q8WZA1 660 aa8.79□□□□□ -1
RIF1-205ENST00000444746 DCPSQ96C86 337 aaKnown RBP8.79□□□□□ -1
RIF1-205ENST00000444746 AP1M1Q9BXS5 423 aa8.79□□□□□ -1
RIF1-205ENST00000444746 SENP2Q9HC62 589 aa8.79□□□□□ -1
RIF1-205ENST00000444746 IMPACTQ9P2X3 320 aa8.79□□□□□ -1
RIF1-205ENST00000444746 INTS8Q75QN2 995 aaKnown RBP8.79□□□□□ -1
RIF1-205ENST00000444746 THOC1Q96FV9 657 aaKnown RBP8.79□□□□□ -1
RIF1-205ENST00000444746 USP27XA6NNY8 438 aa8.78□□□□□ -1
RIF1-205ENST00000444746 E9PMD0 336 aa8.78□□□□□ -1
RIF1-205ENST00000444746 ADCY8P40145 1251 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CDC37Q16543 378 aaPredicted RBP8.78□□□□□ -1
RIF1-205ENST00000444746 PNMA8AQ86V59 439 aaPredicted RBP8.78□□□□□ -1
RIF1-205ENST00000444746 IFT20Q8IY31 132 aa8.78□□□□□ -1
RIF1-205ENST00000444746 KDM5CP41229 1560 aa8.78□□□□□ -1
RIF1-205ENST00000444746 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
RIF1-205ENST00000444746 GH2P01242 217 aa8.78□□□□□ -1
RIF1-205ENST00000444746 STAT1P42224 750 aa8.78□□□□□ -1
RIF1-205ENST00000444746 SLCO1A2P46721 670 aa8.78□□□□□ -1
RIF1-205ENST00000444746 DNM2P50570 870 aa8.78□□□□□ -1
RIF1-205ENST00000444746 GPSM2P81274 684 aa8.78□□□□□ -1
RIF1-205ENST00000444746 TTC31Q49AM3 519 aaPredicted RBP8.78□□□□□ -1
RIF1-205ENST00000444746 CNKSR1Q969H4 720 aa8.78□□□□□ -1
RIF1-205ENST00000444746 TRIM7Q9C029 511 aa8.78□□□□□ -1
RIF1-205ENST00000444746 KANSL2Q9H9L4 492 aa8.78□□□□□ -1
RIF1-205ENST00000444746 DISC1Q9NRI5 854 aa8.78□□□□□ -1
RIF1-205ENST00000444746 AMFRQ9UKV5 643 aa8.78□□□□□ -1
RIF1-205ENST00000444746 MRPL11Q9Y3B7 192 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 NPHP3-ACAD11A0A0J9YXS1 232 aa8.78□□□□□ -1
RIF1-205ENST00000444746 NR2F2P24468 414 aa8.78□□□□□ -1
RIF1-205ENST00000444746 MYL7Q01449 175 aa8.78□□□□□ -1
RIF1-205ENST00000444746 GUCY2DQ02846 1103 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CCDC110Q8TBZ0 833 aa8.78□□□□□ -1
RIF1-205ENST00000444746 LARP4BQ92615 738 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 PDE11AQ9HCR9 933 aa8.78□□□□□ -1
RIF1-205ENST00000444746 NXF1Q9UBU9 619 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 PARP2Q9UGN5 583 aa8.78□□□□□ -1
RIF1-205ENST00000444746 HYOU1Q9Y4L1 999 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CFAP65Q6ZU64 1925 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 NBPF26B4DH59 902 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CHRNA5P30532 468 aa8.78□□□□□ -1
RIF1-205ENST00000444746 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 NBPF15Q8N660 670 aa8.78□□□□□ -1
RIF1-205ENST00000444746 STRBPQ96SI9 672 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 AKT3Q9Y243 479 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CRCPO75575 148 aa8.78□□□□□ -1
RIF1-205ENST00000444746 IFNAR2P48551 515 aa8.78□□□□□ -1
RIF1-205ENST00000444746 KIF22Q14807 665 aa8.78□□□□□ -1
RIF1-205ENST00000444746 LZTS2Q9BRK4 669 aa8.78□□□□□ -1
RIF1-205ENST00000444746 BCRP11274 1271 aa8.78□□□□□ -1
RIF1-205ENST00000444746 CTNNA1P35221 906 aaKnown RBP8.78□□□□□ -1
RIF1-205ENST00000444746 FAM83BQ5T0W9 1011 aa8.78□□□□□ -1
RIF1-205ENST00000444746 HHATQ5VTY9 493 aa8.78□□□□□ -1
RIF1-205ENST00000444746 C4orf50Q6ZRC1 276 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms