RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TSEN34Q9BSV6 310 aaKnown RBP21.63■■□□□ 1.05
CCDC188-202ENST00000444532 VTA1Q9NP79 307 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 PCDHA1Q9Y5I3 950 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 SLC12A7Q9Y666 1083 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 LRRC37A2A6NM11 1700 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 SYNRGQ9UMZ2 1314 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 PNMA6FA0A0J9YX94 578 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 ADAMTS4O75173 837 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 HSPA4P34932 840 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 TNFAIP2Q03169 654 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 LRRC26Q2I0M4 334 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 ADCK5Q3MIX3 580 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 IQSEC1Q6DN90 963 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 SAMD3Q8N6K7 520 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 LENG1Q96BZ8 264 aaPredicted RBP21.62■■□□□ 1.05
CCDC188-202ENST00000444532 PIGSQ96S52 555 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 MYL10Q9BUA6 226 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 SPZ1Q9BXG8 430 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 LRRC2Q9BYS8 371 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 SPC25Q9HBM1 224 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 PHF24Q9UPV7 400 aa21.62■■□□□ 1.05
CCDC188-202ENST00000444532 PPP1R11O60927 126 aaPredicted RBP21.61■■□□□ 1.05
CCDC188-202ENST00000444532 ADCYAP1R1P41586 468 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 TAPT1Q6NXT6 567 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 SYNE3Q6ZMZ3 975 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 HOMER1Q86YM7 354 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 C7orf61Q8IZ16 206 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 KLHDC9Q8NEP7 349 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 TBC1D5Q92609 795 aa21.61■■□□□ 1.05
CCDC188-202ENST00000444532 UPF3AQ9H1J1 476 aaKnown RBP21.61■■□□□ 1.05
CCDC188-202ENST00000444532 MAP3K20Q9NYL2 800 aaKnown RBP21.61■■□□□ 1.05
CCDC188-202ENST00000444532 BAZ2BQ9UIF8 2168 aaKnown RBP21.61■■□□□ 1.05
CCDC188-202ENST00000444532 ADCY6O43306 1168 aa21.6■■□□□ 1.05
CCDC188-202ENST00000444532 EDNRBP24530 442 aa21.6■■□□□ 1.05
CCDC188-202ENST00000444532 CST5P28325 142 aaPredicted RBP21.6■■□□□ 1.05
CCDC188-202ENST00000444532 GJA9P57773 515 aa21.6■■□□□ 1.05
CCDC188-202ENST00000444532 PDE4DQ08499 809 aa21.6■■□□□ 1.05
CCDC188-202ENST00000444532 SLC39A5Q6ZMH5 540 aa21.6■■□□□ 1.05
CCDC188-202ENST00000444532 EEPD1Q7L9B9 569 aa21.6■■□□□ 1.05
CCDC188-202ENST00000444532 SYTL5Q8TDW5 730 aaPredicted RBP21.6■■□□□ 1.05
CCDC188-202ENST00000444532 DDX49Q9Y6V7 483 aaKnown RBP21.6■■□□□ 1.05
CCDC188-202ENST00000444532 CEP290O15078 2479 aa21.59■■□□□ 1.05
CCDC188-202ENST00000444532 ATN1P54259 1190 aaPredicted RBP21.59■■□□□ 1.05
CCDC188-202ENST00000444532 NKX3-2P78367 333 aa21.59■■□□□ 1.05
CCDC188-202ENST00000444532 GHRHRQ02643 423 aa21.59■■□□□ 1.05
CCDC188-202ENST00000444532 NOL8Q76FK4 1167 aaKnown RBP21.59■■□□□ 1.05
CCDC188-202ENST00000444532 FBXO16Q8IX29 292 aaPredicted RBP21.59■■□□□ 1.05
CCDC188-202ENST00000444532 FANCBQ8NB91 859 aa21.59■■□□□ 1.05
CCDC188-202ENST00000444532 PCSK9Q8NBP7 692 aaKnown RBP21.59■■□□□ 1.05
CCDC188-202ENST00000444532 NSUN6Q8TEA1 469 aaKnown RBP21.59■■□□□ 1.05
CCDC188-202ENST00000444532 Q9Y3F1 56 aa21.59■■□□□ 1.05
CCDC188-202ENST00000444532 SNX14Q9Y5W7 946 aa21.59■■□□□ 1.05
CCDC188-202ENST00000444532 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.58■■□□□ 1.05
CCDC188-202ENST00000444532 MOXD2PA6NHM9 499 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 OPLAHO14841 1288 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 CFBP00751 764 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 C6orf222P0C671 652 aaPredicted RBP21.58■■□□□ 1.05
CCDC188-202ENST00000444532 HSD17B4P51659 736 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 KCNA10Q16322 511 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 C1orf53Q5VUE5 145 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 CCSAPQ6IQ19 270 aaPredicted RBP21.58■■□□□ 1.05
CCDC188-202ENST00000444532 FERMT2Q96AC1 680 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 RRP36Q96EU6 259 aaKnown RBP21.58■■□□□ 1.05
CCDC188-202ENST00000444532 TAAR1Q96RJ0 339 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 IWS1Q96ST2 819 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 PDGFCQ9NRA1 345 aa21.58■■□□□ 1.05
CCDC188-202ENST00000444532 GNEQ9Y223 722 aaKnown RBP21.58■■□□□ 1.05
CCDC188-202ENST00000444532 RBM47A0AV96 593 aaKnown RBP21.57■■□□□ 1.04
CCDC188-202ENST00000444532 SMPD1P17405 629 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 ACLYP53396 1101 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 SNX17Q15036 470 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 APOA5Q6Q788 366 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
CCDC188-202ENST00000444532 RMDN3Q96TC7 470 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 AP5M1Q9H0R1 490 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 COL20A1Q9P218 1284 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 DNAH12Q6ZR08 3092 aa21.57■■□□□ 1.04
CCDC188-202ENST00000444532 A0A1W2PQ45 241 aaPredicted RBP21.56■■□□□ 1.04
CCDC188-202ENST00000444532 A0A1W2PQY0 241 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 RXRAP19793 462 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 RTP1P59025 263 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 GNASQ5JWF2 1037 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 BLOC1S2Q6QNY1 142 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 TLK2Q86UE8 772 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 TCEANC2Q96MN5 208 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 JAKMIP1Q96N16 626 aaKnown RBP21.56■■□□□ 1.04
CCDC188-202ENST00000444532 WDR11Q9BZH6 1224 aa21.56■■□□□ 1.04
CCDC188-202ENST00000444532 SEC63Q9UGP8 760 aaKnown RBP21.56■■□□□ 1.04
CCDC188-202ENST00000444532 MYADML2A6NDP7 307 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 PLEKHA8P1O95397 391 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 PSMA5P28066 241 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 FGD1P98174 961 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 ARHGEF16Q5VV41 709 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 MICU3Q86XE3 530 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 PIBF1Q8WXW3 757 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 USP26Q9BXU7 913 aa21.55■■□□□ 1.04
CCDC188-202ENST00000444532 RBM28Q9NW13 759 aaKnown RBP21.55■■□□□ 1.04
CCDC188-202ENST00000444532 ZMYND8Q9ULU4 1186 aaPredicted RBP21.55■■□□□ 1.04
CCDC188-202ENST00000444532 COLQQ9Y215 455 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms