RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 KIAA1211Q6ZU35 1233 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 SMC5Q8IY18 1101 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 RILPL2Q969X0 211 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 TTC14Q96N46 770 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 SEZ6LQ9BYH1 1024 aa23.37■■□□□ 1.33
EDEM1-203ENST00000443790 PTPDC1A2A3K4 754 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 SNHG28P0DPA3 235 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 ACRP10323 421 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 ZNF543Q08ER8 600 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 DUSP28Q4G0W2 176 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 SLC30A10Q6XR72 485 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 CLEC4DQ8WXI8 215 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 TIFAQ96CG3 184 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 HIPK3Q9H422 1215 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 PNMA2Q9UL42 364 aa23.36■■□□□ 1.33
EDEM1-203ENST00000443790 VCANP13611 3396 aa23.35■■□□□ 1.33
EDEM1-203ENST00000443790 MFAP1P55081 439 aaKnown RBP23.35■■□□□ 1.33
EDEM1-203ENST00000443790 GRIN2CQ14957 1233 aa23.35■■□□□ 1.33
EDEM1-203ENST00000443790 ZNF365Q70YC5 407 aa23.35■■□□□ 1.33
EDEM1-203ENST00000443790 RNF41Q9H4P4 317 aaPredicted RBP23.35■■□□□ 1.33
EDEM1-203ENST00000443790 IL23AQ9NPF7 189 aa23.35■■□□□ 1.33
EDEM1-203ENST00000443790 NEDD4P46934 1319 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 UMODL1Q5DID0 1318 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 WDR19Q8NEZ3 1342 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 SDSP20132 328 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 PSMC6P62333 389 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 B4GALNT3Q6L9W6 998 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 RNF207Q6ZRF8 634 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 ZNF576Q9H609 170 aa23.34■■□□□ 1.33
EDEM1-203ENST00000443790 LAMA4Q16363 1823 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 B4GALT4O60513 344 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 CALML3P27482 149 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 ESR2Q92731 530 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 PBX4Q9BYU1 374 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 WDR11Q9BZH6 1224 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 TRPV6Q9H1D0 765 aa23.33■■□□□ 1.33
EDEM1-203ENST00000443790 RBM47A0AV96 593 aaKnown RBP23.32■■□□□ 1.32
EDEM1-203ENST00000443790 GRXCR1A8MXD5 290 aa23.32■■□□□ 1.32
EDEM1-203ENST00000443790 PBX2P40425 430 aa23.32■■□□□ 1.32
EDEM1-203ENST00000443790 RPS6P62753 249 aaKnown RBP23.32■■□□□ 1.32
EDEM1-203ENST00000443790 GPATCH4Q5T3I0 446 aaKnown RBP23.32■■□□□ 1.32
EDEM1-203ENST00000443790 CHD1LQ86WJ1 897 aa23.32■■□□□ 1.32
EDEM1-203ENST00000443790 PLEKHM2Q8IWE5 1019 aa23.32■■□□□ 1.32
EDEM1-203ENST00000443790 HERVK_113Q902F9 699 aa23.32■■□□□ 1.32
EDEM1-203ENST00000443790 NOC4LQ9BVI4 516 aaKnown RBP23.32■■□□□ 1.32
EDEM1-203ENST00000443790 OSBPL3Q9H4L5 887 aa23.32■■□□□ 1.32
EDEM1-203ENST00000443790 ZNF213O14771 459 aa23.31■■□□□ 1.32
EDEM1-203ENST00000443790 ZKSCAN3Q9BRR0 538 aa23.31■■□□□ 1.32
EDEM1-203ENST00000443790 POLR3EQ9NVU0 708 aa23.31■■□□□ 1.32
EDEM1-203ENST00000443790 EDNRBP24530 442 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 NT5C2P49902 561 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 CPT1AP50416 773 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 CCL23P55773 120 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 PDE4DQ08499 809 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 DGKHQ86XP1 1220 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 DNERQ8NFT8 737 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 MPHOSPH6Q99547 160 aaKnown RBP23.3■■□□□ 1.32
EDEM1-203ENST00000443790 WNT8AQ9H1J5 351 aa23.3■■□□□ 1.32
EDEM1-203ENST00000443790 ALDH8A1Q9H2A2 487 aaPredicted RBP23.3■■□□□ 1.32
EDEM1-203ENST00000443790 MTIF3Q9H2K0 278 aaKnown RBP23.3■■□□□ 1.32
EDEM1-203ENST00000443790 CXXC1Q9P0U4 656 aaPredicted RBP23.3■■□□□ 1.32
EDEM1-203ENST00000443790 FGBP02675 491 aa23.29■■□□□ 1.32
EDEM1-203ENST00000443790 GOLGA8HP0CJ92 632 aa23.29■■□□□ 1.32
EDEM1-203ENST00000443790 PURAQ00577 322 aaKnown RBP23.29■■□□□ 1.32
EDEM1-203ENST00000443790 NUCB1Q02818 461 aa23.29■■□□□ 1.32
EDEM1-203ENST00000443790 OR6J1Q8NGC5 347 aa23.29■■□□□ 1.32
EDEM1-203ENST00000443790 CHD9Q3L8U1 2897 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 PPP2R5BQ15173 497 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 RAB30Q15771 203 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 USH1GQ495M9 461 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 CWC27Q6UX04 472 aaKnown RBP23.28■■□□□ 1.32
EDEM1-203ENST00000443790 PNMA1Q8ND90 353 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 CPVLQ9H3G5 476 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 DIAPH3Q9NSV4 1193 aa23.28■■□□□ 1.32
EDEM1-203ENST00000443790 NKRFO15226 690 aaKnown RBP eCLIP23.27■■□□□ 1.32
EDEM1-203ENST00000443790 KDM4AO75164 1064 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 MYL3P08590 195 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 CCDC178Q5BJE1 867 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 OTOP2Q7RTS6 562 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 IQCA1Q86XH1 822 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 USP38Q8NB14 1042 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 SCFD2Q8WU76 684 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 MTG1Q9BT17 334 aaPredicted RBP23.27■■□□□ 1.32
EDEM1-203ENST00000443790 UBA5Q9GZZ9 404 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 TRMT13Q9NUP7 481 aaKnown RBP23.27■■□□□ 1.32
EDEM1-203ENST00000443790 RAD50Q92878 1312 aa23.27■■□□□ 1.32
EDEM1-203ENST00000443790 SPTBN5Q9NRC6 3674 aaKnown RBP23.27■■□□□ 1.32
EDEM1-203ENST00000443790 SUPT20HL2P0C7V6 817 aa23.26■■□□□ 1.31
EDEM1-203ENST00000443790 CDC37Q16543 378 aaPredicted RBP23.26■■□□□ 1.31
EDEM1-203ENST00000443790 BRDTQ58F21 947 aaPredicted RBP23.26■■□□□ 1.31
EDEM1-203ENST00000443790 RGS22Q8NE09 1264 aa23.26■■□□□ 1.31
EDEM1-203ENST00000443790 GPHNQ9NQX3 736 aaPredicted RBP23.26■■□□□ 1.31
EDEM1-203ENST00000443790 TNKSO95271 1327 aa23.26■■□□□ 1.31
EDEM1-203ENST00000443790 SCN10AQ9Y5Y9 1956 aa23.25■■□□□ 1.31
EDEM1-203ENST00000443790 B4DLN1 442 aa23.25■■□□□ 1.31
EDEM1-203ENST00000443790 HIP1O00291 1037 aa23.25■■□□□ 1.31
EDEM1-203ENST00000443790 MRPL12P52815 198 aaKnown RBP23.25■■□□□ 1.31
EDEM1-203ENST00000443790 RPUSD2Q8IZ73 545 aaKnown RBP23.25■■□□□ 1.31
EDEM1-203ENST00000443790 ANKS1AQ92625 1134 aa23.25■■□□□ 1.31
EDEM1-203ENST00000443790 SCLYQ96I15 445 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms