RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 NUB1Q9Y5A7 615 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 EPB41P11171 864 aaKnown RBP11.24□□□□□ -0.61
LIN54-202ENST00000442461 LCA5Q86VQ0 697 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.61
LIN54-202ENST00000442461 GRAMD1AQ96CP6 724 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 IWS1Q96ST2 819 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 GOLPH3LQ9H4A5 285 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 VAT1LQ9HCJ6 419 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 ANLNQ9NQW6 1124 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
LIN54-202ENST00000442461 C15orf41Q9Y2V0 281 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 SLC4A4Q9Y6R1 1079 aa11.24□□□□□ -0.61
LIN54-202ENST00000442461 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 MAN1A2O60476 641 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 ATP1A1P05023 1023 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 EEF1DP29692 281 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 PIK3AP1Q6ZUJ8 805 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 FAM47EQ6ZV65 393 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 TRIM42Q8IWZ5 723 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 BBOF1Q8ND07 529 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 LSM14BQ9BX40 385 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 MRPL44Q9H9J2 332 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 ITGB1BP2Q9UKP3 347 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 ATP5JP18859 108 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 EIF4A3P38919 411 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 AP2B1P63010 937 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 LMNB2Q03252 620 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 GRK7Q8WTQ7 553 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 ATP2A3Q93084 1043 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 AP5Z1O43299 807 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 ZWINTO95229 277 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 IGHMBP2P38935 993 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 STAT1P42224 750 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 KIF11P52732 1056 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 KRT31Q15323 416 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 FAM81AQ8TBF8 368 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 TTC1Q99614 292 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 BTBD18B2RXH4 712 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 PDE5AO76074 875 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 CPP00450 1065 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 FAM200BP0CF97 657 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 ACADSP16219 412 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 GNAT2P19087 354 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 BYSLQ13895 437 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 DPF2Q92785 391 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 XPO6Q96QU8 1125 aaKnown RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 SH2D4AQ9H788 454 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 TBC1D23Q9NUY8 699 aa11.23□□□□□ -0.61
LIN54-202ENST00000442461 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
LIN54-202ENST00000442461 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 HSPA6P17066 643 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ABCB4P21439 1286 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 NAPAP54920 295 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 MED21Q13503 144 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ANO5Q75V66 913 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 OTUD6AQ7L8S5 288 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 SMYD4Q8IYR2 804 aaPredicted RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 KIAA2013Q8IYS2 634 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 PPP4R1Q8TF05 950 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 CNOT6LQ96LI5 555 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 ZIM3Q96PE6 472 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 POC1B-GALNT4F8VUJ3 575 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 IGF2BP3O00425 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIN54-202ENST00000442461 KRT75O95678 551 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 LMNB1P20700 586 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 POLR2FP61218 127 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 NOP14P78316 857 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 ITIH3Q06033 890 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 RASGRP2Q7LDG7 609 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ANKRD2Q9GZV1 360 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ZFP69BQ9UJL9 534 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 E7ENQ6 273 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 TAF5LO75529 589 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
LIN54-202ENST00000442461 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 KPNB1Q14974 876 aaKnown RBP11.22□□□□□ -0.61
LIN54-202ENST00000442461 PPP2R5BQ15173 497 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms