RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 DPCR1Q3MIW9 517 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 USH1GQ495M9 461 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 HAUS3Q68CZ6 603 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 SPICE1Q8N0Z3 855 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 DCPSQ96C86 337 aaKnown RBP6.79□□□□□ -1.32
VPS50-205ENST00000441602 SLF1Q9BQI6 1058 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 NT5C3AQ9H0P0 336 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 ARFGEF1Q9Y6D6 1849 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 C19orf81C9J6K1 198 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 GSDMDP57764 484 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 MORC3Q14149 939 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 ZYXQ15942 572 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 FILIP1LQ4L180 1135 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 NT5DC1Q5TFE4 455 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 ANGEL2Q5VTE6 544 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 SAMD1Q6SPF0 538 aaPredicted RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 SH3RF1Q7Z6J0 888 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 PRPF38AQ8NAV1 312 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 WDR18Q9BV38 432 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 TMEM60Q9H2L4 133 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 RANBP17Q9H2T7 1088 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 ADARB2Q9NS39 739 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 RNF181Q9P0P0 153 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 BAZ2BQ9UIF8 2168 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 SIPA1L1O43166 1804 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 A0A1W2PRG0 241 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 SERPINC1P01008 464 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 CCDC174Q6PII3 467 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 SV2BQ7L1I2 683 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 ENOX1Q8TC92 643 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 FAM20AQ96MK3 541 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 TANGO6Q9C0B7 1094 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 FHDC1Q9C0D6 1143 aaPredicted RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 EXOC1Q9NV70 894 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 TCEAL9Q9UHQ7 104 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 BRCA1P38398 1863 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 PIK3CDO00329 1044 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 PPP1R11O60927 126 aaPredicted RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 TPM2P07951 284 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 SLURP2P0DP57 97 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 ECE1P42892 770 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 ARHGAP4P98171 946 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 KARSQ15046 597 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 KCTD17Q8N5Z5 321 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 SNX29Q8TEQ0 813 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 MAP3K20Q9NYL2 800 aaKnown RBP6.78□□□□□ -1.32
VPS50-205ENST00000441602 GGA3Q9NZ52 723 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 CCPG1Q9ULG6 757 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 ZKSCAN5Q9Y2L8 839 aa6.78□□□□□ -1.32
VPS50-205ENST00000441602 KIF20AO95235 890 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 RPN1P04843 607 aaKnown RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 SREBF1P36956 1147 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 TECP42680 631 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 SARSP49591 514 aaKnown RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 MDM2Q00987 491 aaPredicted RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 DPYDQ12882 1025 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 RRP1BQ14684 758 aaKnown RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 KCNB1Q14721 858 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP49Q70CQ1 688 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 KRT26Q7Z3Y9 468 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 NOC3LQ8WTT2 800 aaKnown RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 ERCC4Q92889 916 aaPredicted RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 TEPSINQ96N21 525 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 WRNIP1Q96S55 665 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 IMPACTQ9P2X3 320 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 PGAP2Q9UHJ9 254 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 PCDHA12Q9UN75 941 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 CYP3A7-CYP3A51PA0A087WV96 503 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 WNT7AO00755 349 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 PPP1R12BO60237 982 aaPredicted RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 TDP2O95551 362 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 PRR29P0C7W0 189 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 CYP3A7P24462 503 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 ASIC1P78348 528 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 E2F4Q16254 413 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 ISM2Q6H9L7 571 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 PLA2G4DQ86XP0 818 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 DHX40Q8IX18 779 aaKnown RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 CTAGE1Q96RT6 745 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 MAF1Q9H063 256 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 CSADQ9Y600 493 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 SYNRGQ9UMZ2 1314 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L19D6RCP7 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L20D6RJB6 530 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 PSMA7O14818 248 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 FLOT1O75955 427 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 CFBP00751 764 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 ICAM1P05362 532 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 CYP3A4P08684 503 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 CCT6AP40227 531 aaKnown RBP6.77□□□□□ -1.33
VPS50-205ENST00000441602 JAG1P78504 1218 aa6.77□□□□□ -1.33
VPS50-205ENST00000441602 USP17L24Q0WX57 530 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms