RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
SCAP-207ENST00000441517 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
SCAP-207ENST00000441517 TAF4BQ92750 862 aa16.73■□□□□ 0.27
SCAP-207ENST00000441517 H7C1D1 291 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 ATP1A2P50993 1020 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 IL17AQ16552 155 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 SECISBP2LQ93073 1101 aaKnown RBP16.72■□□□□ 0.27
SCAP-207ENST00000441517 PSTPIP2Q9H939 334 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 NALCNQ8IZF0 1738 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 A0A1B0GTH6 734 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 NHEJ1Q9H9Q4 299 aaPredicted RBP16.72■□□□□ 0.27
SCAP-207ENST00000441517 PCDHA1Q9Y5I3 950 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 H0YHG0 523 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 ABCB4P21439 1286 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 LONP1P36776 959 aaKnown RBP16.72■□□□□ 0.27
SCAP-207ENST00000441517 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
SCAP-207ENST00000441517 HDXQ7Z353 690 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
SCAP-207ENST00000441517 CYTH3O43739 400 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 EIF4A3P38919 411 aaKnown RBP16.71■□□□□ 0.27
SCAP-207ENST00000441517 MDM2Q00987 491 aaPredicted RBP16.71■□□□□ 0.27
SCAP-207ENST00000441517 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
SCAP-207ENST00000441517 P2RX5Q93086 422 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 PNKPQ96T60 521 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 HYOU1Q9Y4L1 999 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
SCAP-207ENST00000441517 HPDP32754 393 aaPredicted RBP16.71■□□□□ 0.27
SCAP-207ENST00000441517 KRT25Q7Z3Z0 450 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 TAX1BP1Q86VP1 789 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 GPBP1Q86WP2 473 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
SCAP-207ENST00000441517 MRFAP1Q9Y605 127 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 PLA2G4AP47712 749 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 EHHADHQ08426 723 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 TPH2Q8IWU9 490 aa16.71■□□□□ 0.27
SCAP-207ENST00000441517 WDR19Q8NEZ3 1342 aa16.71■□□□□ 0.26
SCAP-207ENST00000441517 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 SASH3O75995 380 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 SSR1P43307 286 aaKnown RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 UHMK1Q8TAS1 419 aaKnown RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 DDX25Q9UHL0 483 aaKnown RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 RWDD2AQ9UIY3 292 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 GABPB1Q06547 395 aaPredicted RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 ARHGAP44Q17R89 818 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 SHROOM1Q2M3G4 852 aaPredicted RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 LACRTQ9GZZ8 138 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 PRDM4Q9UKN5 801 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 GFPT1Q06210 699 aaPredicted RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 ZSCAN26Q16670 478 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
SCAP-207ENST00000441517 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 MTRQ99707 1265 aa16.7■□□□□ 0.26
SCAP-207ENST00000441517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCAP-207ENST00000441517 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 FBXO33Q7Z6M2 555 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
SCAP-207ENST00000441517 PIGOQ8TEQ8 1089 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 DDX12PQ92771 950 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 ZNF512BQ96KM6 892 aaPredicted RBP16.69■□□□□ 0.26
SCAP-207ENST00000441517 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 PCDHAC2Q9Y5I4 1007 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 UTRNP46939 3433 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 RPS6KA4O75676 772 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 DNM2P50570 870 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 POTEB3A0JP26 581 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 POTECB2RU33 542 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 FANCGO15287 622 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
SCAP-207ENST00000441517 POTEBQ6S5H4 581 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 FHOD1Q9Y613 1164 aa16.69■□□□□ 0.26
SCAP-207ENST00000441517 TLDC2A0PJX2 215 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 KIF20AO95235 890 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 GCNT3O95395 438 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 RASA1P20936 1047 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 NFRKBQ6P4R8 1299 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
SCAP-207ENST00000441517 GBP3Q9H0R5 595 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms