RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 GPATCH4Q5T3I0 446 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 MYLIPQ8WY64 445 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 VCANP13611 3396 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 DNAJB2P25686 324 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 CALML3P27482 149 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 CYP2C18P33260 490 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 DGKHQ86XP1 1220 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 CLEC4DQ8WXI8 215 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 HIPK3Q9H422 1215 aa13.65□□□□□ -0.22
UBE2D4-204ENST00000440899 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 WDR19Q8NEZ3 1342 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 B4DLN1 442 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 HIP1O00291 1037 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 IGHDP01880 384 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 FOSL2P15408 326 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 PTGS1P23219 599 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 TMEM63BQ5T3F8 832 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 RNF207Q6ZRF8 634 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 IQCA1Q86XH1 822 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 MPHOSPH6Q99547 160 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 DIAPH3Q9NSV4 1193 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 NEDD4P46934 1319 aa13.64□□□□□ -0.23
UBE2D4-204ENST00000440899 ACRP10323 421 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 CPT1AP50416 773 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 PDE4DQ08499 809 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 SLC30A10Q6XR72 485 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 PNMA1Q8ND90 353 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 TIFAQ96CG3 184 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 ZKSCAN3Q9BRR0 538 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 MAF1Q9H063 256 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-204ENST00000440899 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 B4GALT4O60513 344 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 KDM4AO75164 1064 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 FGBP02675 491 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 EDNRBP24530 442 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 PSMC6P62333 389 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 HERVK_113Q902F9 699 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 NOC4LQ9BVI4 516 aaKnown RBP13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 ALDH8A1Q9H2A2 487 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 ZNF576Q9H609 170 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 KAT14Q9H8E8 782 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 CHD9Q3L8U1 2897 aa13.62□□□□□ -0.23
UBE2D4-204ENST00000440899 KPNA6O60684 536 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 SUPT20HL2P0C7V6 817 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 PURAQ00577 322 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 USH1GQ495M9 461 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 OR6J1Q8NGC5 347 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 MTG1Q9BT17 334 aaPredicted RBP13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 COL25A1Q9BXS0 654 aaPredicted RBP13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 ZSWIM5Q9P217 1185 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 RAD50Q92878 1312 aa13.61□□□□□ -0.23
UBE2D4-204ENST00000440899 LRRC37A2A6NM11 1700 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 GRXCR1A8MXD5 290 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 B4E1Z4 1266 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 MYL3P08590 195 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 CCL23P55773 120 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 RPUSD2Q8IZ73 545 aaKnown RBP13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 ADGRF4Q8IZF3 695 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 ENAHQ8N8S7 591 aaPredicted RBP13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 KRT23Q9C075 422 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 MSRAQ9UJ68 235 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 LCTP09848 1927 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms