RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 KRT9P35527 623 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 MNAT1P51948 309 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 FBXW10Q5XX13 1052 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
HPS4-206ENST00000439453 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.58□□□□□ -0.88
HPS4-206ENST00000439453 RPGRIP1Q96KN7 1286 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 CAPZA3Q96KX2 299 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 CHP1Q99653 195 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 FOXP1Q9H334 677 aaPredicted RBP9.58□□□□□ -0.88
HPS4-206ENST00000439453 LY9Q9HBG7 655 aa9.58□□□□□ -0.88
HPS4-206ENST00000439453 LIMA1Q9UHB6 759 aaKnown RBP9.58□□□□□ -0.88
HPS4-206ENST00000439453 CNOT7Q9UIV1 285 aaKnown RBP9.58□□□□□ -0.88
HPS4-206ENST00000439453 A0A087X0B3 334 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 MYBL2P10244 700 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 SLC5A1P13866 664 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 CKAP4Q07065 602 aaKnown RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 TRIM14Q14142 442 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 KCNV1Q6PIU1 500 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 POTEDQ86YR6 584 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 BCAS4Q8TDM0 211 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 PAGE5Q96GU1 130 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 CAPS2Q9BXY5 557 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 EHD4Q9H223 541 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 VPS16Q9H269 839 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 CXorf56Q9H5V9 222 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 HAUS4Q9H6D7 363 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 CTNND2Q9UQB3 1225 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 THSD7BQ9C0I4 1608 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 GOLGA6BA6NDN3 693 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 COBLO75128 1261 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 ARID4AP29374 1257 aaPredicted RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 USP8P40818 1118 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 COPB1P53618 953 aaKnown RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 PAPD7Q5XG87 772 aaKnown RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 SH3RF1Q7Z6J0 888 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 SGMS1Q86VZ5 419 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 PASKQ96RG2 1323 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 EIF3HO15372 352 aaKnown RBP eCLIP9.57□□□□□ -0.888e-6■□□□□ 10.6
HPS4-206ENST00000439453 TOMM70O94826 608 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 INPP5BP32019 993 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 PSEN1P49768 467 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 DPYDQ12882 1025 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 ANKRD20A12PQ8NF67 263 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 ZNF384Q8TF68 577 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 ADARB2Q9NS39 739 aaKnown RBP9.57□□□□□ -0.88
HPS4-206ENST00000439453 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
HPS4-206ENST00000439453 IQCA1LA6NCM1 817 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 LRRC10BA6NIK2 292 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 IFNAR1P17181 557 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 MAP2K2P36507 400 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 NR5A1Q13285 461 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 RASGRF1Q13972 1273 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 RABEP2Q9H5N1 569 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 AATFQ9NY61 560 aaKnown RBP eCLIP9.56□□□□□ -0.88
HPS4-206ENST00000439453 TAB2Q9NYJ8 693 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 PDS5AQ29RF7 1337 aaKnown RBP9.56□□□□□ -0.88
HPS4-206ENST00000439453 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
HPS4-206ENST00000439453 GNGT1P63211 74 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 PI16Q6UXB8 463 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 GBP6Q6ZN66 633 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 EPSTI1Q96J88 318 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 CCDC122Q5T0U0 273 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 USP50Q70EL3 339 aaPredicted RBP9.56□□□□□ -0.88
HPS4-206ENST00000439453 CAGE1Q8TC20 777 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 SECISBP2LQ93073 1101 aaKnown RBP9.56□□□□□ -0.88
HPS4-206ENST00000439453 JAKMIP2Q96AA8 810 aa9.56□□□□□ -0.88
HPS4-206ENST00000439453 MCAMP43121 646 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 C1QTNF8P60827 252 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 HERVK_113P62684 666 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 CNPY4Q8N129 248 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 AENQ8WTP8 325 aaKnown RBP9.55□□□□□ -0.88
HPS4-206ENST00000439453 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.55□□□□□ -0.881e-6■■□□□ 12.5
HPS4-206ENST00000439453 SSC5DA1L4H1 1573 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 SPAG1Q07617 926 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 LDHDQ86WU2 507 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 CABP5Q9NP86 173 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 FAM184BQ9ULE4 1060 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 TFR2Q9UP52 801 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 MYO3BQ8WXR4 1341 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 GOLGA8KD6RF30 607 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
HPS4-206ENST00000439453 LIFRP42702 1097 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 TTF1Q15361 905 aaPredicted RBP9.55□□□□□ -0.88
HPS4-206ENST00000439453 MYOZ2Q9NPC6 264 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 INCENPQ9NQS7 918 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 SAMM50Q9Y512 469 aa9.55□□□□□ -0.88
HPS4-206ENST00000439453 CCDC196A0A1B0GTZ2 297 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 KCNJ18B7U540 433 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 PDE2AO00408 941 aaPredicted RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 ADD2P35612 726 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 UBXN1Q04323 297 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms