RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 SPATA31A6Q5VVP1 1343 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 GCFC2P16383 781 aaKnown RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 TNNI1P19237 187 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 MAP2K1Q02750 393 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 ZNF577Q9BSK1 485 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 SP8Q8IXZ3 490 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 RASAL2Q9UJF2 1139 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 IKBKBO14920 756 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CASP14P31944 242 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CCDC127Q96BQ5 260 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CUEDC2Q9H467 287 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 GNA14O95837 355 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 TNNC1P63316 161 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CTTNBP2NLQ9P2B4 639 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 hCG_1984214I3L0E3 225 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 ZNF713Q8N859 430 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-205ENST00000439160 DEPTORQ8TB45 409 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 ALDH8A1Q9H2A2 487 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-205ENST00000439160 CALCOCO1Q9P1Z2 691 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
TCOF1-205ENST00000439160 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L22D6RA61 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L17D6RBQ6 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L19D6RCP7 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L20D6RJB6 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 STX10O60499 249 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L24Q0WX57 530 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 STK36Q9NRP7 1315 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 KIF28PB7ZC32 967 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
TCOF1-205ENST00000439160 CCDC25Q86WR0 208 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 METTL13Q8N6R0 699 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 MTA3Q9BTC8 594 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 BCRP11274 1271 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 BRDTQ58F21 947 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-205ENST00000439160 C12orf60Q5U649 245 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 MAGEF1Q9HAY2 307 aa13.58□□□□□ -0.24
TCOF1-205ENST00000439160 GOLGA6L7A0A1B0GV03 622 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 TUBB4BP68371 445 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 EPB41L4AQ9HCS5 686 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 TLDC2A0PJX2 215 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 KRT19P08727 400 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 CD19P15391 556 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 STAT1P42224 750 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 DNAJC21Q5F1R6 531 aaKnown RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ARL6IP4Q66PJ3 421 aaKnown RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 TMED8Q6PL24 325 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 P2RX5Q93086 422 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 CEP104O60308 925 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ASNSP08243 561 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 AKR1B1P15121 316 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 PTPROQ16827 1216 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ZNF658Q5TYW1 1059 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 SMIM23A6NLE4 172 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ABCB4P21439 1286 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 NR2F2P24468 414 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 IGDCC4Q8TDY8 1250 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-205ENST00000439160 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 NOD1Q9Y239 953 aa13.57□□□□□ -0.24
TCOF1-205ENST00000439160 ORC4O43929 436 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 KLRK1P26718 216 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 ANTXR2P58335 489 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 C8orf74Q6P047 294 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 ENOX1Q8TC92 643 aaKnown RBP13.56□□□□□ -0.24
TCOF1-205ENST00000439160 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-205ENST00000439160 DISC1Q9NRI5 854 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 MTUS1Q9ULD2 1270 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 DLATP10515 647 aaKnown RBP13.56□□□□□ -0.24
TCOF1-205ENST00000439160 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
TCOF1-205ENST00000439160 PPP1R7Q15435 360 aa13.56□□□□□ -0.24
TCOF1-205ENST00000439160 ZRSR2Q15696 482 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms