RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
LINC00475-207ENST00000438322 GLT1D1Q96MS3 346 aa12.25□□□□□ -0.45
LINC00475-207ENST00000438322 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
LINC00475-207ENST00000438322 AP5M1Q9H0R1 490 aa12.25□□□□□ -0.45
LINC00475-207ENST00000438322 TMEM39AQ9NV64 488 aa12.25□□□□□ -0.45
LINC00475-207ENST00000438322 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
LINC00475-207ENST00000438322 TRIM43BA6NCK2 446 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 DYNC1LI2O43237 492 aaPredicted RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 PRC1O43663 620 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 SEC24BO95487 1268 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 PARP1P09874 1014 aaKnown RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 RAG1P15918 1043 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 ANAPC15P60006 121 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 FGD1P98174 961 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 WTAPQ15007 396 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 SNX17Q15036 470 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 TMEM63BQ5T3F8 832 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 GPATCH4Q5T3I0 446 aaKnown RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 BLOC1S2Q6QNY1 142 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 CYB5R4Q7L1T6 521 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 CHST3Q7LGC8 479 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 TLK2Q86UE8 772 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 MB21D2Q8IYB1 491 aaPredicted RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 PCSK9Q8NBP7 692 aaKnown RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 TRIM43Q96BQ3 446 aaPredicted RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 KATNBL1Q9H079 304 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 ADD3Q9UEY8 706 aaKnown RBP12.24□□□□□ -0.45
LINC00475-207ENST00000438322 TAF6LQ9Y6J9 622 aa12.24□□□□□ -0.45
LINC00475-207ENST00000438322 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 DCDC2CA8MYV0 355 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 SMPD1P17405 629 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 GJA9P57773 515 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 CHMP4BP1P59074 171 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 PDE4DQ08499 809 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 ADCK5Q3MIX3 580 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 TMEM67Q5HYA8 995 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 NFXL1Q6ZNB6 911 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 DHX32Q7L7V1 743 aaKnown RBP12.23□□□□□ -0.45
LINC00475-207ENST00000438322 ADGRF4Q8IZF3 695 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 DEFB123Q8N688 67 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 KLHDC9Q8NEP7 349 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 FAM161BQ96MY7 647 aa12.23□□□□□ -0.45
LINC00475-207ENST00000438322 TSEN34Q9BSV6 310 aaKnown RBP12.23□□□□□ -0.45
LINC00475-207ENST00000438322 WDR19Q8NEZ3 1342 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 MYH7BA7E2Y1 1941 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 CCDC69A6NI79 296 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 SNHG28P0DPA3 235 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 CASTP20810 708 aaKnown RBP12.22□□□□□ -0.45
LINC00475-207ENST00000438322 RPS6P62753 249 aaKnown RBP12.22□□□□□ -0.45
LINC00475-207ENST00000438322 SHHQ15465 462 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 FSCN1Q16658 493 aaKnown RBP12.22□□□□□ -0.45
LINC00475-207ENST00000438322 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 CLEC4DQ8WXI8 215 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 C22orf23Q9BZE7 217 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 PPP1R12CQ9BZL4 782 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 TM6SF1Q9BZW5 370 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 UPF3AQ9H1J1 476 aaKnown RBP12.22□□□□□ -0.45
LINC00475-207ENST00000438322 CYP46A1Q9Y6A2 500 aa12.22□□□□□ -0.45
LINC00475-207ENST00000438322 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
LINC00475-207ENST00000438322 MYL3P08590 195 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 ITGB8P26012 769 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 PSMC6P62333 389 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 IGDCC4Q8TDY8 1250 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 TBC1D5Q92609 795 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.45
LINC00475-207ENST00000438322 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 VTA1Q9NP79 307 aa12.21□□□□□ -0.45
LINC00475-207ENST00000438322 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
LINC00475-207ENST00000438322 KLRF2D3W0D1 207 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
LINC00475-207ENST00000438322 ZEB2O60315 1214 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 CFBP00751 764 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 CST5P28325 142 aaPredicted RBP12.2□□□□□ -0.46
LINC00475-207ENST00000438322 LIFRP42702 1097 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 ANTXR2P58335 489 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 EXOSC10Q01780 885 aaKnown RBP12.2□□□□□ -0.46
LINC00475-207ENST00000438322 FPGSQ05932 587 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 SEC23AQ15436 765 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 LRIT3Q3SXY7 679 aa12.2□□□□□ -0.46
LINC00475-207ENST00000438322 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms