RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CALML4Q96GE6 196 aa17.36■□□□□ 0.37
SGCE-205ENST00000437425 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
SGCE-205ENST00000437425 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
SGCE-205ENST00000437425 ANO3Q9BYT9 981 aa17.36■□□□□ 0.37
SGCE-205ENST00000437425 DDX25Q9UHL0 483 aaKnown RBP17.36■□□□□ 0.37
SGCE-205ENST00000437425 ABCB11O95342 1321 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 ESPNB1AK53 854 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 MEIS2O14770 477 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 TBX3O15119 743 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
SGCE-205ENST00000437425 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
SGCE-205ENST00000437425 AMPD3Q01432 767 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 DPYDQ12882 1025 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 DHX8Q14562 1220 aaKnown RBP17.35■□□□□ 0.37
SGCE-205ENST00000437425 CABP7Q86V35 215 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 SLFN12Q8IYM2 578 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 SAMD3Q8N6K7 520 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 MBOAT7Q96N66 472 aa17.35■□□□□ 0.37
SGCE-205ENST00000437425 ATAD5Q96QE3 1844 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 ZNF75DP51815 510 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 ANGEL2Q5VTE6 544 aaKnown RBP17.34■□□□□ 0.37
SGCE-205ENST00000437425 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
SGCE-205ENST00000437425 CCDC47Q96A33 483 aaKnown RBP17.34■□□□□ 0.37
SGCE-205ENST00000437425 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 PICK1Q9NRD5 415 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 RABGAP1Q9Y3P9 1069 aa17.34■□□□□ 0.37
SGCE-205ENST00000437425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.37
SGCE-205ENST00000437425 MARCH6O60337 910 aa17.33■□□□□ 0.37
SGCE-205ENST00000437425 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.37
SGCE-205ENST00000437425 SREBF1P36956 1147 aa17.33■□□□□ 0.37
SGCE-205ENST00000437425 KIFC2Q96AC6 838 aa17.33■□□□□ 0.37
SGCE-205ENST00000437425 ADARB2Q9NS39 739 aaKnown RBP17.33■□□□□ 0.37
SGCE-205ENST00000437425 STK17AQ9UEE5 414 aa17.33■□□□□ 0.37
SGCE-205ENST00000437425 LRWD1Q9UFC0 647 aa17.33■□□□□ 0.37
SGCE-205ENST00000437425 USP17L15C9J2P7 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L13C9JLJ4 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L11C9JVI0 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L18D6R9N7 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L22D6RA61 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L17D6RBQ6 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L19D6RCP7 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L20D6RJB6 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 FOXN1O15353 648 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 TDP2O95551 362 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 CYP3A4P08684 503 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 TECP42680 631 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 TXKP42681 527 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 AFMP43652 599 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L24Q0WX57 530 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 KARSQ15046 597 aaKnown RBP17.32■□□□□ 0.36
SGCE-205ENST00000437425 USH1GQ495M9 461 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 Q4G0T1 1027 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 NBPF12Q5TAG4 269 aaPredicted RBP17.32■□□□□ 0.36
SGCE-205ENST00000437425 USP17L6PQ6QN14 398 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
SGCE-205ENST00000437425 CRYGNQ8WXF5 182 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 KBTBD4Q9NVX7 518 aa17.32■□□□□ 0.36
SGCE-205ENST00000437425 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
SGCE-205ENST00000437425 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
SGCE-205ENST00000437425 AP5Z1O43299 807 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 POLR2MP0CAP2 368 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 CIITAP33076 1130 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 ARHGAP4P98171 946 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 KCNB1Q14721 858 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 KRT79Q5XKE5 535 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 SYT17Q9BSW7 474 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 GGA3Q9NZ52 723 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 KDM3AQ9Y4C1 1321 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 CBFA2T2O43439 604 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 SLC37A4O43826 429 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 ICAM1P05362 532 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 PPP1R2P41236 205 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 NCAPHQ15003 741 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
SGCE-205ENST00000437425 MCF2L2Q86YR7 1114 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 KCTD17Q8N5Z5 321 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 FAM20AQ96MK3 541 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
SGCE-205ENST00000437425 PCDHA12Q9UN75 941 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 ZKSCAN5Q9Y2L8 839 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 SBF1O95248 1867 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 DOCK1Q14185 1865 aa17.31■□□□□ 0.36
SGCE-205ENST00000437425 EDIL3O43854 480 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
SGCE-205ENST00000437425 DRC7Q8IY82 874 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 GRAMD1CQ8IYS0 662 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 ZNF280CQ8ND82 737 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 C12orf42Q96LP6 360 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 WRNIP1Q96S55 665 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 MAF1Q9H063 256 aa17.3■□□□□ 0.36
SGCE-205ENST00000437425 NT5C3AQ9H0P0 336 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms