RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 RAB34Q9BZG1 259 aa28.97■■■□□ 2.23
CPNE1-216ENST00000437340 SYNRGQ9UMZ2 1314 aa28.97■■■□□ 2.23
CPNE1-216ENST00000437340 SKILP12757 684 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 TECP42680 631 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 GMPSP49915 693 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-216ENST00000437340 CCZ1BP86790 482 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 CCZ1P86791 482 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-216ENST00000437340 PDIA5Q14554 519 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 UBE2SQ16763 222 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 DNTTIP2Q5QJE6 756 aaKnown RBP28.96■■■□□ 2.23
CPNE1-216ENST00000437340 ZBED3Q96IU2 234 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-216ENST00000437340 ARHGEF10LQ9HCE6 1279 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 AMNQ9BXJ7 453 aa28.96■■■□□ 2.23
CPNE1-216ENST00000437340 R3HCC1Q9Y3T6 440 aaKnown RBP28.96■■■□□ 2.23
CPNE1-216ENST00000437340 TDP2O95551 362 aa28.95■■■□□ 2.22
CPNE1-216ENST00000437340 PLCG1P19174 1290 aa28.95■■■□□ 2.22
CPNE1-216ENST00000437340 SYDE2Q5VT97 1194 aa28.95■■■□□ 2.22
CPNE1-216ENST00000437340 MYOZ2Q9NPC6 264 aa28.95■■■□□ 2.22
CPNE1-216ENST00000437340 SLC37A4O43826 429 aa28.94■■■□□ 2.22
CPNE1-216ENST00000437340 SFPQP23246 707 aaKnown RBP eCLIP28.94■■■□□ 2.228e-7■□□□□ 11.1
CPNE1-216ENST00000437340 ZNF280AP59817 542 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-216ENST00000437340 CALML4Q96GE6 196 aa28.94■■■□□ 2.22
CPNE1-216ENST00000437340 SAMSN1Q9NSI8 373 aaKnown RBP28.94■■■□□ 2.22
CPNE1-216ENST00000437340 A0A1W2PRG0 241 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 NRDCO43847 1150 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 TXKP42681 527 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 AP3B2Q13367 1082 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 KLHL10Q6JEL2 608 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 VEZTQ9HBM0 779 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 RWDD2AQ9UIY3 292 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 CDKAL1Q5VV42 579 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 ARMCX5Q6P1M9 558 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 SMYD4Q8IYR2 804 aaPredicted RBP28.93■■■□□ 2.22
CPNE1-216ENST00000437340 MMTAG2Q9BU76 263 aaKnown RBP28.93■■■□□ 2.22
CPNE1-216ENST00000437340 GTPBP4Q9BZE4 634 aaKnown RBP28.93■■■□□ 2.22
CPNE1-216ENST00000437340 LRWD1Q9UFC0 647 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 TMX2Q9Y320 296 aa28.93■■■□□ 2.22
CPNE1-216ENST00000437340 TMEM232C9JQI7 657 aa28.92■■■□□ 2.22
CPNE1-216ENST00000437340 TEX2Q8IWB9 1127 aa28.92■■■□□ 2.22
CPNE1-216ENST00000437340 MICALL2Q8IY33 904 aa28.92■■■□□ 2.22
CPNE1-216ENST00000437340 KCND1Q9NSA2 647 aa28.92■■■□□ 2.22
CPNE1-216ENST00000437340 INTS13Q9NVM9 706 aa28.92■■■□□ 2.22
CPNE1-216ENST00000437340 EGFRP00533 1210 aa28.91■■■□□ 2.22
CPNE1-216ENST00000437340 USP11P51784 963 aa28.91■■■□□ 2.22
CPNE1-216ENST00000437340 AMPD3Q01432 767 aa28.91■■■□□ 2.22
CPNE1-216ENST00000437340 FBXO11Q86XK2 927 aa28.91■■■□□ 2.22
CPNE1-216ENST00000437340 DDX25Q9UHL0 483 aaKnown RBP28.91■■■□□ 2.22
CPNE1-216ENST00000437340 ZBTB21Q9ULJ3 1066 aa28.91■■■□□ 2.22
CPNE1-216ENST00000437340 WNT10BO00744 389 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 RHOBTB3O94955 611 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 KCNJ6P48051 423 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 TRAF1Q13077 416 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 PAK1Q13153 545 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 NBPF9Q3BBW0 867 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 LRRC15Q8TF66 581 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 CTAGE1Q96RT6 745 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 NUP88Q99567 741 aaPredicted RBP28.9■■■□□ 2.22
CPNE1-216ENST00000437340 C7orf25Q9BPX7 421 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 GOPCQ9HD26 462 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 RNF181Q9P0P0 153 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 STK17AQ9UEE5 414 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 KLRC4O43908 158 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 MAP3K10Q02779 954 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 IKQ13123 557 aaPredicted RBP28.9■■■□□ 2.22
CPNE1-216ENST00000437340 MOXD1Q6UVY6 613 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 PLIN2Q99541 437 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 CNOT7Q9UIV1 285 aaKnown RBP28.9■■■□□ 2.22
CPNE1-216ENST00000437340 CTNND2Q9UQB3 1225 aa28.9■■■□□ 2.22
CPNE1-216ENST00000437340 A0A1B0GTH6 734 aa28.89■■■□□ 2.22
CPNE1-216ENST00000437340 STX17P56962 302 aa28.89■■■□□ 2.22
CPNE1-216ENST00000437340 NR1I3Q14994 352 aa28.89■■■□□ 2.22
CPNE1-216ENST00000437340 CCDC47Q96A33 483 aaKnown RBP28.89■■■□□ 2.22
CPNE1-216ENST00000437340 ANO3Q9BYT9 981 aa28.89■■■□□ 2.22
CPNE1-216ENST00000437340 USP17L15C9J2P7 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L13C9JLJ4 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L11C9JVI0 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L18D6R9N7 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L22D6RA61 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L17D6RBQ6 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L19D6RCP7 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L20D6RJB6 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 MEIS2O14770 477 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 TPM2P07951 284 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L24Q0WX57 530 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 KMT5BQ4FZB7 885 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 HSP90AA4PQ58FG1 418 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 USP17L6PQ6QN14 398 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 CCDC112Q8NEF3 446 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 TRIM9Q9C026 710 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 TMEM39BQ9GZU3 492 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 PGAP2Q9UHJ9 254 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 CYP3A7-CYP3A51PA0A087WV96 503 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 FOSP01100 380 aaPredicted RBP28.88■■■□□ 2.21
CPNE1-216ENST00000437340 CYP3A7P24462 503 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 APTXQ7Z2E3 356 aaKnown RBP28.88■■■□□ 2.21
CPNE1-216ENST00000437340 ADSSL1Q8N142 457 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 PRIMPOLQ96LW4 560 aa28.88■■■□□ 2.21
CPNE1-216ENST00000437340 STAT2P52630 851 aa28.87■■■□□ 2.21
CPNE1-216ENST00000437340 TPD52L1Q16890 204 aaPredicted RBP28.87■■■□□ 2.21
CPNE1-216ENST00000437340 SPECC1LQ69YQ0 1117 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms