RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MAN1B1Q9UKM7 699 aa23.89■■□□□ 1.41
PTPRF-207ENST00000436724 GOLGA6L19H0YKK7 550 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 TXLNAP40222 546 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 SARSP49591 514 aaKnown RBP23.88■■□□□ 1.41
PTPRF-207ENST00000436724 PDXDC2PQ6P474 469 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 SMARCE1Q969G3 411 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 GJA10Q969M2 543 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 KIAA1683Q9H0B3 1180 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 FEM1BQ9UK73 627 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 UBA7P41226 1012 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 ORC2Q13416 577 aaPredicted RBP23.88■■□□□ 1.41
PTPRF-207ENST00000436724 PRKG1Q13976 671 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 NT5DC1Q5TFE4 455 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 UIMC1Q96RL1 719 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 MTRQ99707 1265 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 ZNF112Q9UJU3 913 aa23.88■■□□□ 1.41
PTPRF-207ENST00000436724 SSC5DA1L4H1 1573 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 PTMAP06454 111 aaKnown RBP23.87■■□□□ 1.41
PTPRF-207ENST00000436724 SPP2Q13103 211 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 PPP4R3AQ6IN85 833 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 FAM160B2Q86V87 743 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 SCYL3Q8IZE3 742 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 TBC1D5Q92609 795 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 DISC1Q9NRI5 854 aa23.87■■□□□ 1.41
PTPRF-207ENST00000436724 DDX25Q9UHL0 483 aaKnown RBP23.87■■□□□ 1.41
PTPRF-207ENST00000436724 PLA2G6O60733 806 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 LMOD1P29536 600 aaPredicted RBP23.86■■□□□ 1.41
PTPRF-207ENST00000436724 RASSF8Q8NHQ8 419 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 SPATA20Q8TB22 786 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.86■■□□□ 1.41
PTPRF-207ENST00000436724 DOCK1Q14185 1865 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 NAALADL2Q58DX5 795 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 LRRC15Q8TF66 581 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 BLZF1Q9H2G9 400 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 EMILIN3Q9NT22 766 aa23.86■■□□□ 1.41
PTPRF-207ENST00000436724 STAT6P42226 847 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 CCSER1Q9C0I3 900 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 ADARB2Q9NS39 739 aaKnown RBP23.85■■□□□ 1.41
PTPRF-207ENST00000436724 GINM1Q9NU53 330 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 TPM2P07951 284 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 PTPRAP18433 802 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 DPYDQ12882 1025 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 AP3B2Q13367 1082 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 IGSF22Q8N9C0 903 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 LPAR1Q92633 364 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 KLRG1Q96E93 195 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 BPIFA3Q9BQP9 254 aa23.85■■□□□ 1.41
PTPRF-207ENST00000436724 WDR46O15213 610 aaKnown RBP23.84■■□□□ 1.41
PTPRF-207ENST00000436724 CFBP00751 764 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 VCAM1P19320 739 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 CABP7Q86V35 215 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 HAS1Q92839 578 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 CCDC34Q96HJ3 373 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 AK8Q96MA6 479 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 TANGO6Q9C0B7 1094 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 POTEMA6NI47 508 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 SPDYE3A6NKU9 549 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 ARHGAP4P98171 946 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 MORC3Q14149 939 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 RRAGBQ5VZM2 374 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 FCHSD1Q86WN1 690 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 CRYGNQ8WXF5 182 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 HOOK2Q96ED9 719 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 MMTAG2Q9BU76 263 aaKnown RBP23.84■■□□□ 1.41
PTPRF-207ENST00000436724 TRIM5Q9C035 493 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 PICK1Q9NRD5 415 aa23.84■■□□□ 1.41
PTPRF-207ENST00000436724 CUL4BQ13620 913 aa23.83■■□□□ 1.41
PTPRF-207ENST00000436724 NCAPHQ15003 741 aa23.83■■□□□ 1.41
PTPRF-207ENST00000436724 LDHDQ86WU2 507 aa23.83■■□□□ 1.41
PTPRF-207ENST00000436724 AGBL1Q96MI9 1066 aa23.83■■□□□ 1.41
PTPRF-207ENST00000436724 PYM1Q9BRP8 204 aaKnown RBP23.83■■□□□ 1.41
PTPRF-207ENST00000436724 TTC12Q9H892 705 aaPredicted RBP23.83■■□□□ 1.41
PTPRF-207ENST00000436724 PPP2R3BQ9Y5P8 575 aa23.83■■□□□ 1.41
PTPRF-207ENST00000436724 ZHX2Q9Y6X8 837 aa23.83■■□□□ 1.41
PTPRF-207ENST00000436724 SLF1Q9BQI6 1058 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 ADM5C9JUS6 153 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 SMC2O95347 1197 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 GCFC2P16383 781 aaKnown RBP23.82■■□□□ 1.4
PTPRF-207ENST00000436724 PLCG1P19174 1290 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 USP11P51784 963 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 TERF1P54274 439 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 PRPF38AQ8NAV1 312 aaKnown RBP23.82■■□□□ 1.4
PTPRF-207ENST00000436724 ZNF536O15090 1300 aa23.82■■□□□ 1.4
PTPRF-207ENST00000436724 FXR2P51116 673 aaKnown RBP eCLIP23.81■■□□□ 1.4
PTPRF-207ENST00000436724 BACE1P56817 501 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 ZNF280CQ8ND82 737 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 LRWD1Q9UFC0 647 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 PIK3CDO00329 1044 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 FLOT1O75955 427 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 SPC24Q8NBT2 197 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 WDR18Q9BV38 432 aa23.81■■□□□ 1.4
PTPRF-207ENST00000436724 RPAP3Q9H6T3 665 aaPredicted RBP23.81■■□□□ 1.4
PTPRF-207ENST00000436724 R3HCC1Q9Y3T6 440 aaKnown RBP23.81■■□□□ 1.4
PTPRF-207ENST00000436724 FOSP01100 380 aaPredicted RBP23.8■■□□□ 1.4
PTPRF-207ENST00000436724 SREBF1P36956 1147 aa23.8■■□□□ 1.4
PTPRF-207ENST00000436724 TMEM266Q2M3C6 531 aa23.8■■□□□ 1.4
PTPRF-207ENST00000436724 SUPT20HL1Q3ZLR7 823 aa23.8■■□□□ 1.4
PTPRF-207ENST00000436724 CPXCR1Q8N123 301 aa23.8■■□□□ 1.4
PTPRF-207ENST00000436724 ZNF830Q96NB3 372 aaPredicted RBP23.8■■□□□ 1.4
PTPRF-207ENST00000436724 PITPNM2Q9BZ72 1349 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms