RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 VTI1AQ96AJ9 217 aa12.93□□□□□ -0.34
SPTLC1P4-201ENST00000435997 CHMP4CQ96CF2 233 aa12.93□□□□□ -0.34
SPTLC1P4-201ENST00000435997 TMEM47Q9BQJ4 181 aa12.93□□□□□ -0.34
SPTLC1P4-201ENST00000435997 NOC4LQ9BVI4 516 aaKnown RBP12.93□□□□□ -0.34
SPTLC1P4-201ENST00000435997 CXXC1Q9P0U4 656 aaPredicted RBP12.93□□□□□ -0.34
SPTLC1P4-201ENST00000435997 WDR19Q8NEZ3 1342 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 ZEB2O60315 1214 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 SLC16A2P36021 539 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 BAATQ14032 418 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 MCMDC2Q4G0Z9 681 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 NSMFQ6X4W1 530 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 AP5M1Q9H0R1 490 aa12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
SPTLC1P4-201ENST00000435997 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 PSMC6P62333 389 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 PURAQ00577 322 aaKnown RBP12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 RAB30Q15771 203 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 TRPV6Q9H1D0 765 aa12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 YBX2Q9Y2T7 364 aaKnown RBP12.91□□□□□ -0.34
SPTLC1P4-201ENST00000435997 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 TTC14Q96N46 770 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
SPTLC1P4-201ENST00000435997 NEDD4P46934 1319 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CHD9Q3L8U1 2897 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RPS6P62753 249 aaKnown RBP12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 FGBP02675 491 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PFKMP08237 780 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 NT5C2P49902 561 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CPT1AP50416 773 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CCL23P55773 120 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 HAND2P61296 217 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MAF1Q9H063 256 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 TNKSO95271 1327 aa12.88□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 A6NJR5 290 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CALML3P27482 149 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 NFRKBQ6P4R8 1299 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RGS22Q8NE09 1264 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PRDM6Q9NQX0 595 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 XIRP2A4UGR9 3374 aa12.87□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 ARIH2O95376 493 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CYP2C9P11712 490 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 DGKHQ86XP1 1220 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 ATXN2LQ8WWM7 1075 aaKnown RBP12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 ANKS1AQ92625 1134 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 ESR2Q92731 530 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SCLYQ96I15 445 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RAD50Q92878 1312 aa12.86□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SDSP20132 328 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms