RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TRAF1Q13077 416 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
HLA-F-220ENST00000434407 PPP2R5BQ15173 497 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 MORC4Q8TE76 937 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 OGDHLQ9ULD0 1010 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 PCDHA1Q9Y5I3 950 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 LOC102724159A0A0B4J2E5 919 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 ZNF865P0CJ78 1059 aaPredicted RBP21.29■■□□□ 1
HLA-F-220ENST00000434407 PWP2Q15269 919 aaKnown RBP21.29■■□□□ 1
HLA-F-220ENST00000434407 RTN1Q16799 776 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 PRAMEF19Q5SWL8 479 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 SLC30A10Q6XR72 485 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 ARMCX2Q7L311 632 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 UBE2Q1Q7Z7E8 422 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 HOMER1Q86YM7 354 aa21.29■■□□□ 1
HLA-F-220ENST00000434407 UPF3BQ9BZI7 483 aaKnown RBP21.29■■□□□ 1
HLA-F-220ENST00000434407 PTPDC1A2A3K4 754 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 ASB14A6NK59 587 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 SEPT4O43236 478 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 MSCO60682 206 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 MCF2L2Q86YR7 1114 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 CMTR1Q8N1G2 835 aaKnown RBP21.28■■□□□ 1
HLA-F-220ENST00000434407 SAMD3Q8N6K7 520 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 TBC1D5Q92609 795 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 RRP36Q96EU6 259 aaKnown RBP21.28■■□□□ 1
HLA-F-220ENST00000434407 PURBQ96QR8 312 aaKnown RBP21.28■■□□□ 1
HLA-F-220ENST00000434407 KATNBL1Q9H079 304 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 ALDH8A1Q9H2A2 487 aaPredicted RBP21.28■■□□□ 1
HLA-F-220ENST00000434407 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.28■■□□□ 1
HLA-F-220ENST00000434407 DDX20Q9UHI6 824 aaKnown RBP21.28■■□□□ 1
HLA-F-220ENST00000434407 LRRC37A2A6NM11 1700 aa21.28■■□□□ 1
HLA-F-220ENST00000434407 GOLGA8AA7E2F4 631 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 GOLGA8BA8MQT2 603 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 CDC27P30260 824 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 HSD17B4P51659 736 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 DNERQ8NFT8 737 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 ABHD16BQ9H3Z7 469 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 MAP3K20Q9NYL2 800 aaKnown RBP21.27■■□□□ 1
HLA-F-220ENST00000434407 ADD3Q9UEY8 706 aaKnown RBP21.27■■□□□ 1
HLA-F-220ENST00000434407 CNPY2Q9Y2B0 182 aa21.27■■□□□ 1
HLA-F-220ENST00000434407 CNTNAP5Q8WYK1 1306 aa21.27■□□□□ 0.99
HLA-F-220ENST00000434407 TFRCP02786 760 aaKnown RBP21.26■□□□□ 0.99
HLA-F-220ENST00000434407 CALML3P27482 149 aa21.26■□□□□ 0.99
HLA-F-220ENST00000434407 METAP2P50579 478 aaKnown RBP eCLIP21.26■□□□□ 0.99
HLA-F-220ENST00000434407 ALDH5A1P51649 535 aaPredicted RBP21.26■□□□□ 0.99
HLA-F-220ENST00000434407 ANKLE1Q8NAG6 615 aa21.26■□□□□ 0.99
HLA-F-220ENST00000434407 SYTL5Q8TDW5 730 aaPredicted RBP21.26■□□□□ 0.99
HLA-F-220ENST00000434407 PDRG1Q9NUG6 133 aa21.26■□□□□ 0.99
HLA-F-220ENST00000434407 CCDC196A0A1B0GTZ2 297 aa21.25■□□□□ 0.99
HLA-F-220ENST00000434407 EDNRBP24530 442 aa21.25■□□□□ 0.99
HLA-F-220ENST00000434407 CNGA1P29973 690 aa21.25■□□□□ 0.99
HLA-F-220ENST00000434407 PDIA3P30101 505 aaKnown RBP21.25■□□□□ 0.99
HLA-F-220ENST00000434407 MNX1P50219 401 aaPredicted RBP21.25■□□□□ 0.99
HLA-F-220ENST00000434407 ACVR2BQ13705 512 aa21.25■□□□□ 0.99
HLA-F-220ENST00000434407 COL20A1Q9P218 1284 aa21.25■□□□□ 0.99
HLA-F-220ENST00000434407 SEC63Q9UGP8 760 aaKnown RBP21.25■□□□□ 0.99
HLA-F-220ENST00000434407 DNAH12Q6ZR08 3092 aa21.25■□□□□ 0.99
HLA-F-220ENST00000434407 ADD1P35611 737 aaKnown RBP21.24■□□□□ 0.99
HLA-F-220ENST00000434407 CCDC82Q8N4S0 544 aa21.24■□□□□ 0.99
HLA-F-220ENST00000434407 PIBF1Q8WXW3 757 aa21.24■□□□□ 0.99
HLA-F-220ENST00000434407 ZNF274Q96GC6 653 aaPredicted RBP21.24■□□□□ 0.99
HLA-F-220ENST00000434407 MLLT1Q03111 559 aaPredicted RBP21.23■□□□□ 0.99
HLA-F-220ENST00000434407 KIAA1217Q5T5P2 1943 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 CFBP00751 764 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 AKR1A1P14550 325 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 NTRK3Q16288 839 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 POTEHQ6S545 545 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 TAAR1Q96RJ0 339 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 FAM184BQ9ULE4 1060 aa21.22■□□□□ 0.99
HLA-F-220ENST00000434407 NAP1L2Q9ULW6 460 aaPredicted RBP21.22■□□□□ 0.99
HLA-F-220ENST00000434407 DDX49Q9Y6V7 483 aaKnown RBP21.22■□□□□ 0.99
HLA-F-220ENST00000434407 hCG_1642624A0A1W2PR95 340 aa21.21■□□□□ 0.99
HLA-F-220ENST00000434407 FARP2O94887 1054 aaPredicted RBP21.21■□□□□ 0.99
HLA-F-220ENST00000434407 TAPT1Q6NXT6 567 aa21.21■□□□□ 0.99
HLA-F-220ENST00000434407 VTA1Q9NP79 307 aa21.21■□□□□ 0.99
HLA-F-220ENST00000434407 ZHX1Q9UKY1 873 aaPredicted RBP21.21■□□□□ 0.99
HLA-F-220ENST00000434407 V9GY48 417 aaPredicted RBP21.21■□□□□ 0.99
HLA-F-220ENST00000434407 CEP290O15078 2479 aa21.2■□□□□ 0.98
HLA-F-220ENST00000434407 GCOM1H8Y6P7 765 aaPredicted RBP21.2■□□□□ 0.98
HLA-F-220ENST00000434407 POLR2MP0CAP2 368 aa21.2■□□□□ 0.98
HLA-F-220ENST00000434407 CCDC144BQ3MJ40 725 aa21.2■□□□□ 0.98
HLA-F-220ENST00000434407 NSUN6Q8TEA1 469 aaKnown RBP21.2■□□□□ 0.98
HLA-F-220ENST00000434407 IWS1Q96ST2 819 aa21.2■□□□□ 0.98
HLA-F-220ENST00000434407 RMDN3Q96TC7 470 aa21.2■□□□□ 0.98
HLA-F-220ENST00000434407 RBM47A0AV96 593 aaKnown RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 B4DLN1 442 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 hCG_1984214I3L0E3 225 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 PIK3CDO00329 1044 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 ADCY6O43306 1168 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 DUSP11O75319 330 aaKnown RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 RARBP10826 455 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 IFNAR1P17181 557 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 RBM25P49756 843 aaKnown RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 MRPL12P52815 198 aaKnown RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 ANO1Q5XXA6 986 aa21.19■□□□□ 0.98
HLA-F-220ENST00000434407 ZNF713Q8N859 430 aaPredicted RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 DIS3LQ8TF46 1054 aaKnown RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 MPHOSPH6Q99547 160 aaKnown RBP21.19■□□□□ 0.98
HLA-F-220ENST00000434407 KIF2CQ99661 725 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms