RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PCDHB10Q9UN67 800 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 SLC12A7Q9Y666 1083 aa6.68□□□□□ -1.34
PTPN4-205ENST00000433888 CELA3BP08861 270 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 NCAM1P13591 858 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 KCNC1P48547 511 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 GNPTABQ3T906 1256 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 ADGRG2Q8IZP9 1017 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 ADCY4Q8NFM4 1077 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 PHAXQ9H814 394 aaKnown RBP6.67□□□□□ -1.34
PTPN4-205ENST00000433888 SUSD2Q9UGT4 822 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 EFR3BQ9Y2G0 817 aa6.67□□□□□ -1.34
PTPN4-205ENST00000433888 A0A1B0GTL3 188 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 SH3D21A4FU49 640 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 SCAMP3O14828 347 aaKnown RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 PRICKLE3O43900 615 aaPredicted RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 MC3RP41968 323 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 EIF6P56537 245 aaKnown RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 ZFYVE27Q5T4F4 411 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 TMCO4Q5TGY1 634 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 HEATR6Q6AI08 1181 aaKnown RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 LIPIQ6XZB0 460 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 PRRT2Q7Z6L0 340 aaPredicted RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 ZNF526Q8TF50 670 aaPredicted RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 TSPAN17Q96FV3 270 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 RCC1LQ96I51 464 aaKnown RBP6.66□□□□□ -1.34
PTPN4-205ENST00000433888 SPATA32Q96LK8 384 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 FGD4Q96M96 766 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 CRBNQ96SW2 442 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 RXFP1Q9HBX9 757 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 PMF1-BGLAPU3KQ54 211 aa6.66□□□□□ -1.34
PTPN4-205ENST00000433888 STXBP3O00186 592 aa6.65□□□□□ -1.34
PTPN4-205ENST00000433888 EPHX1P07099 455 aa6.65□□□□□ -1.34
PTPN4-205ENST00000433888 SLC7A5Q01650 507 aa6.65□□□□□ -1.34
PTPN4-205ENST00000433888 DPY19L1Q2PZI1 675 aa6.65□□□□□ -1.34
PTPN4-205ENST00000433888 B3GNT8Q7Z7M8 397 aa6.65□□□□□ -1.34
PTPN4-205ENST00000433888 RGS22Q8NE09 1264 aa6.65□□□□□ -1.34
PTPN4-205ENST00000433888 CGGBP1Q9UFW8 167 aaPredicted RBP6.65□□□□□ -1.34
PTPN4-205ENST00000433888 C2orf71A6NGG8 1288 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 PPM1BO75688 479 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 CASP7P55210 303 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 GRB10Q13322 594 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 RTP5Q14D33 572 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 OR6P1Q8NGX9 317 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 ALG3Q92685 438 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 SHDQ96IW2 340 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 BCAS3Q9H6U6 928 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 DBR1Q9UK59 544 aaKnown RBP6.64□□□□□ -1.35
PTPN4-205ENST00000433888 RWDD3Q9Y3V2 267 aa6.64□□□□□ -1.35
PTPN4-205ENST00000433888 PMLP29590 882 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 GJA8P48165 433 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 EFEMP1Q12805 493 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
PTPN4-205ENST00000433888 DBX2Q6ZNG2 339 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 CPNE8Q86YQ8 564 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 NETO2Q8NC67 525 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 GPRASP2Q96D09 838 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 GBP3Q9H0R5 595 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 BACE2Q9Y5Z0 518 aa6.63□□□□□ -1.35
PTPN4-205ENST00000433888 SEPHS1P49903 392 aa6.62□□□□□ -1.35
PTPN4-205ENST00000433888 MFAP1P55081 439 aaKnown RBP6.62□□□□□ -1.35
PTPN4-205ENST00000433888 ADAT2Q7Z6V5 191 aaKnown RBP6.62□□□□□ -1.35
PTPN4-205ENST00000433888 GGNQ86UU5 652 aa6.62□□□□□ -1.35
PTPN4-205ENST00000433888 CPA5Q8WXQ8 436 aa6.62□□□□□ -1.35
PTPN4-205ENST00000433888 NOX5Q96PH1 765 aa6.62□□□□□ -1.35
PTPN4-205ENST00000433888 GULP1Q9UBP9 304 aa6.62□□□□□ -1.35
PTPN4-205ENST00000433888 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
PTPN4-205ENST00000433888 C7orf72A4D263 438 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 PAMP19021 973 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 AMPD2Q01433 879 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 SLC9A5Q14940 896 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 COPS5Q92905 334 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
PTPN4-205ENST00000433888 SPATA6Q9NWH7 488 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-205ENST00000433888 NOBOXO60393 691 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 ADRB1P08588 477 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 HDLBPQ00341 1268 aaKnown RBP6.6□□□□□ -1.35
PTPN4-205ENST00000433888 PLP2Q04941 152 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-205ENST00000433888 NT5DC1Q5TFE4 455 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 CABP7Q86V35 215 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 CARFQ8N187 725 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 SMARCC2Q8TAQ2 1214 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 PLEKHO2Q8TD55 490 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN4-205ENST00000433888 APEX2Q9UBZ4 518 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-205ENST00000433888 DUSP10Q9Y6W6 482 aa6.6□□□□□ -1.35
PTPN4-205ENST00000433888 NPHP3-ACAD11A0A0J9YXS1 232 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 ZBTB7AO95365 584 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 SPATS1Q496A3 300 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 MBLAC2Q68D91 279 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 WWC2Q6AWC2 1192 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 KIAA1211LQ6NV74 962 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 FERMT3Q86UX7 667 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 FAM169BQ8N8A8 192 aa6.59□□□□□ -1.35
PTPN4-205ENST00000433888 DPF3Q92784 378 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms