RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 COMMD3-BMI1R4GMX3 469 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 LCA5LO95447 670 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 POLR2FP61218 127 aaKnown RBP11.99□□□□□ -0.49
CCDC171-202ENST00000432954 ZNF268Q14587 947 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-202ENST00000432954 TAF11Q15544 211 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 PDCD7Q8N8D1 485 aaKnown RBP11.99□□□□□ -0.49
CCDC171-202ENST00000432954 AGAP11Q8TF27 550 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 OSBPL7Q9BZF2 842 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 MIS12Q9H081 205 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 EPB41L4AQ9HCS5 686 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-202ENST00000432954 ATP8A2Q9NTI2 1148 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
CCDC171-202ENST00000432954 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-202ENST00000432954 KANSL1LA0AUZ9 987 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 SPECC1L-ADORA2AF8WAN1 911 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 PRLRP16471 622 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 CD9P21926 228 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 LMNB2Q03252 620 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 SLC27A3Q5K4L6 730 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 TMTC4Q5T4D3 741 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 BARGINQ6ZT62 677 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 DGLUCYQ7Z3D6 616 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 COG1Q8WTW3 980 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 LENG1Q96BZ8 264 aaPredicted RBP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 HIC2Q96JB3 615 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 HGH1Q9BTY7 390 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 CHMP3Q9Y3E7 222 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ATP6V1DQ9Y5K8 247 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 CFAP43Q8NDM7 1665 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 CFAP73A6NFT4 308 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 EPB41P11171 864 aaKnown RBP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ATP5DP30049 168 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 BNIP1Q12981 228 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 MVPQ14764 893 aaKnown RBP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 BBS9Q3SYG4 887 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 RNF220Q5VTB9 566 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 LLGL2Q6P1M3 1020 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ZNF598Q86UK7 904 aaKnown RBP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 TRIML2Q8N7C3 387 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ITPKCQ96DU7 683 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 SRCIN1Q9C0H9 1055 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 NSRP1Q9H0G5 558 aaKnown RBP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 CNNM2Q9H8M5 875 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC171-202ENST00000432954 MKL2Q9ULH7 1088 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 GAKO14976 1311 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 ZNF536O15090 1300 aa11.98□□□□□ -0.49
CCDC171-202ENST00000432954 M0QX08 132 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 AGPSO00116 658 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 CSPG5O95196 566 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 FAM107AO95990 144 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 ASLP04424 464 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 GLI1P08151 1106 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 SFPQP23246 707 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC171-202ENST00000432954 GGCXP38435 758 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 SARSP49591 514 aaKnown RBP11.97□□□□□ -0.49
CCDC171-202ENST00000432954 KCTD16Q68DU8 428 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 CAPN12Q6ZSI9 719 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 MCM10Q7L590 875 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 MAML1Q92585 1016 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 FNBP1Q96RU3 617 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 NDEL1Q9GZM8 345 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 MRGBPQ9NV56 204 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 NDUFA13Q9P0J0 144 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 TSC22D4Q9Y3Q8 395 aa11.97□□□□□ -0.49
CCDC171-202ENST00000432954 KIF28PB7ZC32 967 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 SPTLC1O15269 473 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 APOEP02649 317 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 GSTA1P08263 222 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 ITGA2BP08514 1039 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 CES1P23141 567 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 HPCAP84074 193 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 HSPA14Q0VDF9 509 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
CCDC171-202ENST00000432954 LAPTM5Q13571 262 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 ARL13BQ3SXY8 428 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 IL23RQ5VWK5 629 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 DAB2IPQ5VWQ8 1189 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 FOXB2Q5VYV0 432 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 NCAPH2Q6IBW4 605 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 TMEM154Q6P9G4 183 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 TAOK1Q7L7X3 1001 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 FAM186BQ8IYM0 893 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 APPL2Q8NEU8 664 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 TIPINQ9BVW5 301 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 NDFIP2Q9NV92 336 aa11.96□□□□□ -0.49
CCDC171-202ENST00000432954 PDP2Q9P2J9 529 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms