RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 SAMM50Q9Y512 469 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 MYH3P11055 1940 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 LAD1O00515 517 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 TUBB4AP04350 444 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 OR8K1Q8NGG5 319 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 NLRC4Q9NPP4 1024 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 UBR2Q8IWV8 1755 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 AKAP11Q9UKA4 1901 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 PPP1R3GB7ZBB8 358 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 TBCAO75347 108 aaKnown RBP12.71□□□□□ -0.37
CLDN4-202ENST00000431918 HOXA13P31271 388 aaPredicted RBP12.71□□□□□ -0.37
CLDN4-202ENST00000431918 GPS2Q13227 327 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 PLS1Q14651 629 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 TC2NQ8N9U0 490 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 DDX4Q9NQI0 724 aaKnown RBP12.71□□□□□ -0.37
CLDN4-202ENST00000431918 SLIT2O94813 1529 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 LAMA4Q16363 1823 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 PNMA6FA0A0J9YX94 578 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 MEIS1O00470 390 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 ECE2O60344 883 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 GH2P01242 217 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 P2RX5Q93086 422 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 AK8Q96MA6 479 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 SEPT11Q9NVA2 429 aaKnown RBP12.71□□□□□ -0.37
CLDN4-202ENST00000431918 OGFRQ9NZT2 677 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.37
CLDN4-202ENST00000431918 MFAP3LO75121 409 aa12.71□□□□□ -0.38
CLDN4-202ENST00000431918 DLGAP5Q15398 846 aa12.71□□□□□ -0.38
CLDN4-202ENST00000431918 TMED8Q6PL24 325 aaPredicted RBP12.71□□□□□ -0.38
CLDN4-202ENST00000431918 CPXCR1Q8N123 301 aa12.71□□□□□ -0.38
CLDN4-202ENST00000431918 CCDC17Q96LX7 622 aa12.71□□□□□ -0.38
CLDN4-202ENST00000431918 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.38
CLDN4-202ENST00000431918 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.38
CLDN4-202ENST00000431918 FXR1P51114 621 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 CDC37Q16543 378 aaPredicted RBP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 MIGA2Q7L4E1 593 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 WDR24Q96S15 920 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 PSMB7Q99436 277 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 KANSL2Q9H9L4 492 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 GLI3P10071 1580 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 IL1R1P14778 569 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 SARSP49591 514 aaKnown RBP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 FAM193AP78312 1265 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 NR1I3Q14994 352 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 GOLGA1Q92805 767 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 A0A1B0GTH6 734 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 FAM237AA0A1B0GTK4 181 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 MAEAQ7L5Y9 396 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 KRT222Q8N1A0 295 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 FLAD1Q8NFF5 587 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
CLDN4-202ENST00000431918 ADD3Q9UEY8 706 aaKnown RBP12.7□□□□□ -0.38
CLDN4-202ENST00000431918 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 CTAGE8P0CG41 777 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 RHBDL3P58872 404 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 KIF5AQ12840 1032 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 TRIM14Q14142 442 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 BMS1Q14692 1282 aaKnown RBP12.69□□□□□ -0.38
CLDN4-202ENST00000431918 IL17AQ16552 155 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 QRICH1Q2TAL8 776 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 DCAF17Q5H9S7 520 aaPredicted RBP12.69□□□□□ -0.38
CLDN4-202ENST00000431918 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 CTAGE4Q8IX94 777 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 SLC35F6Q8N357 371 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 INTS13Q9NVM9 706 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 FGRP09769 529 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 SRGNP10124 158 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 DNM2P50570 870 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 STK4Q13043 487 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLDN4-202ENST00000431918 NAA15Q9BXJ9 866 aaKnown RBP12.69□□□□□ -0.38
CLDN4-202ENST00000431918 EPN1Q9Y6I3 576 aaPredicted RBP12.69□□□□□ -0.38
CLDN4-202ENST00000431918 ENC1O14682 589 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 KRT86O43790 486 aa12.69□□□□□ -0.38
CLDN4-202ENST00000431918 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms