RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 PSMC6P62333 389 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 CLEC4DQ8WXI8 215 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 WDR11Q9BZH6 1224 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 TRPV6Q9H1D0 765 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 RNF41Q9H4P4 317 aaPredicted RBP17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 MCM3APO60318 1980 aa17.8■□□□□ 0.44
CSNK1E-208ENST00000431611 SDSP20132 328 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 PBX2P40425 430 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 AAMPQ13685 434 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 RNF207Q6ZRF8 634 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 TBC1D10CQ8IV04 446 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 PBX4Q9BYU1 374 aa17.79■□□□□ 0.44
CSNK1E-208ENST00000431611 UMODL1Q5DID0 1318 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 B4GALT4O60513 344 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 FGBP02675 491 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 SNHG28P0DPA3 235 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 CCL23P55773 120 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 SMC5Q8IY18 1101 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 HERVK_113Q902F9 699 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 ESR2Q92731 530 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 MPHOSPH6Q99547 160 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 NOC4LQ9BVI4 516 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 MTIF3Q9H2K0 278 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 POLR3EQ9NVU0 708 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 UNC80Q8N2C7 3258 aa17.78■□□□□ 0.44
CSNK1E-208ENST00000431611 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 RBM47A0AV96 593 aaKnown RBP17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 ZNF213O14771 459 aa17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 CPT1AP50416 773 aa17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 RPS6P62753 249 aaKnown RBP17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 PDE4DQ08499 809 aa17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.44
CSNK1E-208ENST00000431611 LRRC37A2A6NM11 1700 aa17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 MYL3P08590 195 aa17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 GPATCH4Q5T3I0 446 aaKnown RBP17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 OR6J1Q8NGC5 347 aa17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 ALDH8A1Q9H2A2 487 aaPredicted RBP17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 MSRAQ9UJ68 235 aa17.76■□□□□ 0.43
CSNK1E-208ENST00000431611 NEDD4P46934 1319 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 SUPT20HL2P0C7V6 817 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 GOLGA8HP0CJ92 632 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 NT5C2P49902 561 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 PURAQ00577 322 aaKnown RBP17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 RAB30Q15771 203 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 OTOP2Q7RTS6 562 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 PLEKHM2Q8IWE5 1019 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 RPUSD2Q8IZ73 545 aaKnown RBP17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 DNERQ8NFT8 737 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 MTG1Q9BT17 334 aaPredicted RBP17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 UBA5Q9GZZ9 404 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 WNT8AQ9H1J5 351 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
CSNK1E-208ENST00000431611 B4DLN1 442 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 NKRFO15226 690 aaKnown RBP eCLIP17.74■□□□□ 0.437e-9■■■□□ 16.7
CSNK1E-208ENST00000431611 EDNRBP24530 442 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 MRPL12P52815 198 aaKnown RBP17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 USH1GQ495M9 461 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 CCDC178Q5BJE1 867 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 CWC27Q6UX04 472 aaKnown RBP17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 RGS22Q8NE09 1264 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 PRDM12Q9H4Q4 367 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 TRMT13Q9NUP7 481 aaKnown RBP17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 CUL9Q8IWT3 2517 aa17.74■□□□□ 0.43
CSNK1E-208ENST00000431611 TNKSO95271 1327 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 RAD50Q92878 1312 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 CDH23Q9H251 3354 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 KPNA6O60684 536 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 KDM4AO75164 1064 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 IGHDP01880 384 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 CYP2C9P11712 490 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 NUCB1Q02818 461 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 FAM47CQ5HY64 1035 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 USP38Q8NB14 1042 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 SCLYQ96I15 445 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 KAT14Q9H8E8 782 aa17.73■□□□□ 0.43
CSNK1E-208ENST00000431611 A6NJR5 290 aa17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 HIP1O00291 1037 aa17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 TXNP10599 105 aaKnown RBP17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 CDC37Q16543 378 aaPredicted RBP17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 ANKS1AQ92625 1134 aa17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 ZSCAN10Q96SZ4 725 aaPredicted RBP17.72■□□□□ 0.43
CSNK1E-208ENST00000431611 NKX2-4Q9H2Z4 354 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms