RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 IQCF3P0C7M6 154 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 CYP2D6P10635 497 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 COPB2P35606 906 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 ERVK-21P61565 698 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 DEFB103AP81534 67 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 ICA1Q05084 483 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
ATG4B-212ENST00000430617 FAM83BQ5T0W9 1011 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
ATG4B-212ENST00000430617 ADHFE1Q8IWW8 467 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
ATG4B-212ENST00000430617 TNKSO95271 1327 aa11.99□□□□□ -0.49
ATG4B-212ENST00000430617 LINC01553A4QN01 128 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 DYNC1LI2O43237 492 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-212ENST00000430617 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
ATG4B-212ENST00000430617 SMPD1P17405 629 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 SDSP20132 328 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
ATG4B-212ENST00000430617 CNTN2Q02246 1040 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 HERC4Q5GLZ8 1057 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-212ENST00000430617 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
ATG4B-212ENST00000430617 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 SEZ6LQ9BYH1 1024 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 BACH2Q9BYV9 841 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 PRKAG3Q9UGI9 489 aa11.98□□□□□ -0.49
ATG4B-212ENST00000430617 RGS20O76081 388 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 EEF2P13639 858 aaKnown RBP11.97□□□□□ -0.49
ATG4B-212ENST00000430617 ATP5JP18859 108 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 RFC2P35250 354 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 BMP8AQ7Z5Y6 402 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 RNF135Q8IUD6 432 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATG4B-212ENST00000430617 EDAQ92838 391 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 PBXIP1Q96AQ6 731 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 TGS1Q96RS0 853 aaKnown RBP11.97□□□□□ -0.49
ATG4B-212ENST00000430617 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
ATG4B-212ENST00000430617 PDGFCQ9NRA1 345 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 MCM9Q9NXL9 1143 aa11.97□□□□□ -0.49
ATG4B-212ENST00000430617 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 KRT37O76014 449 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 GPNMBQ14956 572 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 TCTN1Q2MV58 587 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 ASCL5Q7RTU5 278 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 ERMP1Q7Z2K6 904 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 CPXCR1Q8N123 301 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 C17orf80Q9BSJ5 609 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 AP5M1Q9H0R1 490 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 SH2D4AQ9H788 454 aa11.96□□□□□ -0.49
ATG4B-212ENST00000430617 EPG5Q9HCE0 2579 aa11.96□□□□□ -0.5
ATG4B-212ENST00000430617 MYO10Q9HD67 2058 aa11.96□□□□□ -0.5
ATG4B-212ENST00000430617 ZFHX4Q86UP3 3567 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 GVINP1Q7Z2Y8 2422 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 CACNA1GO43497 2377 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 TMEM221A6NGB7 291 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 M0R296 226 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 RAD21O60216 631 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 CDC45O75419 566 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 BAIAP3O94812 1187 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 LTBRP36941 435 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 KCNJ6P48051 423 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 COL19A1Q14993 1142 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 EP400NLQ6ZTU2 488 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATG4B-212ENST00000430617 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 PABPC5Q96DU9 382 aaKnown RBP11.95□□□□□ -0.5
ATG4B-212ENST00000430617 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-212ENST00000430617 PRRX2Q99811 253 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 HAUS7Q99871 368 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 UPF3BQ9BZI7 483 aaKnown RBP11.95□□□□□ -0.5
ATG4B-212ENST00000430617 RAVER2Q9HCJ3 691 aaKnown RBP11.95□□□□□ -0.5
ATG4B-212ENST00000430617 ZNF292O60281 2723 aa11.95□□□□□ -0.5
ATG4B-212ENST00000430617 SOWAHBA6NEL2 793 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 ZEB2O60315 1214 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 IGSF3O75054 1194 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 GJB5O95377 273 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 VCPP55072 806 aaKnown RBP11.94□□□□□ -0.5
ATG4B-212ENST00000430617 TCEAL5Q5H9L2 206 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 TAPT1Q6NXT6 567 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 FAM117BQ6P1L5 589 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 TRIM67Q6ZTA4 783 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 FAM133AQ8N9E0 248 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 MRPL38Q96DV4 380 aaKnown RBP11.94□□□□□ -0.5
ATG4B-212ENST00000430617 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 KIAA1671Q9BY89 1806 aa11.94□□□□□ -0.5
ATG4B-212ENST00000430617 PURAQ00577 322 aaKnown RBP11.93□□□□□ -0.5
ATG4B-212ENST00000430617 DLX2Q07687 328 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-212ENST00000430617 SMAD2Q15796 467 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms