RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NLRP5P59047 1200 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 RBL2Q08999 1139 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 PAK1Q13153 545 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 E2F4Q16254 413 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 PFKFB3Q16875 520 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 WHAMMP3Q1A5X7 153 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 SLC10A5Q5PT55 438 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 ZNF658Q5TYW1 1059 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 SPTY2D1Q68D10 685 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 CC2D1AQ6P1N0 951 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 CYP26C1Q6V0L0 522 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 CTU1Q7Z7A3 348 aaKnown RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 TRMT44Q8IYL2 757 aaKnown RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 CCDC82Q8N4S0 544 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 CCDC12Q8WUD4 166 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-205ENST00000429662 ANKS1AQ92625 1134 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 IQCDQ96DY2 449 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 MED15Q96RN5 788 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 ANKRD2Q9GZV1 360 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 CUEDC2Q9H467 287 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 GPRC5DQ9NZD1 345 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 ABCF2Q9UG63 623 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 LAMB1P07942 1786 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 LAMB2P55268 1798 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 DUOX1Q9NRD9 1551 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 EYSQ5T1H1 3165 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 NPR1P16066 1061 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 AFMP43652 599 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 PTGDRQ13258 359 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 STIM1Q13586 685 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 KCNB1Q14721 858 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 ZNF174Q15697 407 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 RRAGBQ5VZM2 374 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 ZNF662Q6ZS27 426 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 FBXO33Q7Z6M2 555 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 DGKHQ86XP1 1220 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 RTKN2Q8IZC4 609 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 TXLNBQ8N3L3 684 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 CCDC148Q8NFR7 591 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 SDR42E1Q8WUS8 393 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 CCDC47Q96A33 483 aaKnown RBP9.78□□□□□ -0.84
GABPB1-205ENST00000429662 EPSTI1Q96J88 318 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 WDR24Q96S15 920 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 LZTS2Q9BRK4 669 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 CNTNAP5Q8WYK1 1306 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 MUC3AQ02505 3323 aa9.78□□□□□ -0.84
GABPB1-205ENST00000429662 A0A1W2PQC6 194 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 N4BP3O15049 544 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.84
GABPB1-205ENST00000429662 PLEKHA8P1O95397 391 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 MCM3P25205 808 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 EEF1GP26641 437 aaKnown RBP9.77□□□□□ -0.84
GABPB1-205ENST00000429662 CYP2C19P33261 490 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 USP5P45974 858 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 COPB1P53618 953 aaKnown RBP9.77□□□□□ -0.84
GABPB1-205ENST00000429662 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.84
GABPB1-205ENST00000429662 CRY2Q49AN0 593 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 WWC2Q6AWC2 1192 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 KLHL10Q6JEL2 608 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 PDXDC2PQ6P474 469 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 USP49Q70CQ1 688 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 GRAMD1CQ8IYS0 662 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 DAGLBQ8NCG7 672 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 MSANTD4Q8NCY6 345 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 LRRN4CLQ8ND94 238 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 PTCD2Q8WV60 388 aaKnown RBP9.77□□□□□ -0.84
GABPB1-205ENST00000429662 NAPGQ99747 312 aaPredicted RBP9.77□□□□□ -0.84
GABPB1-205ENST00000429662 NUP58Q9BVL2 599 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 PARD6BQ9BYG5 372 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 NYXQ9GZU5 481 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 ACBD3Q9H3P7 528 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 PSD3Q9NYI0 1048 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 RAB21Q9UL25 225 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.84
GABPB1-205ENST00000429662 A0A087X0B3 334 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 SHTN1A0MZ66 631 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 SOWAHDA6NJG2 315 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 TEX33O43247 280 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 TBC1D8O95759 1140 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
GABPB1-205ENST00000429662 CASP14P31944 242 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 PRPHP41219 470 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 ORC2Q13416 577 aaPredicted RBP9.76□□□□□ -0.85
GABPB1-205ENST00000429662 KRT31Q15323 416 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 NPY5RQ15761 445 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 KIF4BQ2VIQ3 1234 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 TCP11X2Q5H9J9 407 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 RAD9BQ6WBX8 426 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 HDXQ7Z353 690 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 ADGRA1Q86SQ6 560 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 AMOTL1Q8IY63 956 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 BLIDQ8IZY5 108 aa9.76□□□□□ -0.85
GABPB1-205ENST00000429662 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms