RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 STIM1Q13586 685 aa18.23■□□□□ 0.51
MBD4-203ENST00000429544 GIMAP8Q8ND71 665 aaPredicted RBP18.23■□□□□ 0.51
MBD4-203ENST00000429544 CPLX3Q8WVH0 158 aa18.23■□□□□ 0.51
MBD4-203ENST00000429544 C7orf25Q9BPX7 421 aa18.23■□□□□ 0.51
MBD4-203ENST00000429544 EXOC1Q9NV70 894 aa18.23■□□□□ 0.51
MBD4-203ENST00000429544 POTEMA6NI47 508 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 N4BP3O15049 544 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 PMS1P54277 932 aaKnown RBP18.22■□□□□ 0.51
MBD4-203ENST00000429544 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
MBD4-203ENST00000429544 REXO1L1PQ8IX06 675 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 ANKRD20A12PQ8NF67 263 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
MBD4-203ENST00000429544 ENTPD3O75355 529 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 PDE4DQ08499 809 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
MBD4-203ENST00000429544 DDX25Q9UHL0 483 aaKnown RBP18.22■□□□□ 0.51
MBD4-203ENST00000429544 PPP2R2CQ9Y2T4 447 aa18.22■□□□□ 0.51
MBD4-203ENST00000429544 ATRNL1Q5VV63 1379 aa18.21■□□□□ 0.51
MBD4-203ENST00000429544 H7C1D1 291 aa18.21■□□□□ 0.51
MBD4-203ENST00000429544 PSMA7O14818 248 aa18.21■□□□□ 0.51
MBD4-203ENST00000429544 TOGARAM2Q6ZUX3 1019 aa18.21■□□□□ 0.51
MBD4-203ENST00000429544 CDK5RAP3Q96JB5 506 aa18.21■□□□□ 0.51
MBD4-203ENST00000429544 PNMA5Q96PV4 448 aa18.21■□□□□ 0.51
MBD4-203ENST00000429544 USP17L15C9J2P7 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L13C9JLJ4 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L11C9JVI0 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L18D6R9N7 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L22D6RA61 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L17D6RBQ6 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L19D6RCP7 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L20D6RJB6 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 ZSCAN12O43309 604 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 SNAP25P60880 206 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 JAG1P78504 1218 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 AMPD3Q01432 767 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L24Q0WX57 530 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 PPP4R3AQ6IN85 833 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 POTEAQ6S8J7 498 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 TRIM47Q96LD4 638 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 PANX2Q96RD6 677 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 CSRNP1Q96S65 589 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 RAB34Q9BZG1 259 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 PCDHA1Q9Y5I3 950 aa18.21■□□□□ 0.5
MBD4-203ENST00000429544 LRRC10BA6NIK2 292 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 GH2P01242 217 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 MCM6Q14566 821 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 IRF2BP1Q8IU81 584 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 BLOC1S4Q9NUP1 217 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
MBD4-203ENST00000429544 F5H6K3 240 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 MFAP3LO75121 409 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 NDUFB10O96000 172 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 KLRC3Q07444 240 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
MBD4-203ENST00000429544 RBM26Q5T8P6 1007 aaKnown RBP18.2■□□□□ 0.5
MBD4-203ENST00000429544 SV2BQ7L1I2 683 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 GJA10Q969M2 543 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 STK17AQ9UEE5 414 aa18.2■□□□□ 0.5
MBD4-203ENST00000429544 RGS17Q9UGC6 210 aaPredicted RBP18.2■□□□□ 0.5
MBD4-203ENST00000429544 ITIH6Q6UXX5 1313 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 GOLGB1Q14789 3259 aaKnown RBP18.19■□□□□ 0.5
MBD4-203ENST00000429544 TCP10L2B9ZVM9 353 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 RAD17O75943 681 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 GYPCP04921 128 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 FCER1AP12319 257 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 CASP14P31944 242 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
MBD4-203ENST00000429544 CCDC93Q567U6 631 aa18.19■□□□□ 0.5
MBD4-203ENST00000429544 SRRTQ9BXP5 876 aaKnown RBP18.19■□□□□ 0.5
MBD4-203ENST00000429544 COL2A1P02458 1487 aaPredicted RBP18.19■□□□□ 0.5
MBD4-203ENST00000429544 CLRN2A0PK11 232 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 MARCH6O60337 910 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 STK4Q13043 487 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 PDIA5Q14554 519 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 MTF1Q14872 753 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 TTI2Q6NXR4 508 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 GMCL1P1Q8NEA9 526 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 HAS1Q92839 578 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 PDCL3Q9H2J4 239 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 SOWAHDA6NJG2 315 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 GCFC2P16383 781 aaKnown RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 ETF1P62495 437 aaKnown RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 NCBP1Q09161 790 aaKnown RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 NAA30Q147X3 362 aaPredicted RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 RSBN1LQ6PCB5 846 aaPredicted RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 DHTKD1Q96HY7 919 aaPredicted RBP18.18■□□□□ 0.5
MBD4-203ENST00000429544 UIMC1Q96RL1 719 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 DESI2Q9BSY9 194 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 GLT8D2Q9H1C3 349 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 THAP9Q9H5L6 903 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 DNAI1Q9UI46 699 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms