RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PPP2R5BQ15173 497 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 SEC23AQ15436 765 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 SH3RF3Q8TEJ3 882 aaPredicted RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 IFT81Q8WYA0 676 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 CNOT6LQ96LI5 555 aaKnown RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 N4BP2Q86UW6 1770 aaPredicted RBP8.98□□□□□ -0.97
HPS4-205ENST00000429411 CRYBG1Q9Y4K1 1723 aa8.98□□□□□ -0.97
HPS4-205ENST00000429411 DDAH1O94760 285 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 KCNJ6P48051 423 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 ATP2C1P98194 919 aaPredicted RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 SLC7A5Q01650 507 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 CASP8Q14790 479 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 BRD3Q15059 726 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 CLEC10AQ8IUN9 316 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 GJA10Q969M2 543 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 COA7Q96BR5 231 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 ZNF512BQ96KM6 892 aaPredicted RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 C6orf50Q9HD87 102 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 DISC1Q9NRI5 854 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 DUSP10Q9Y6W6 482 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 ZNF804BA4D1E1 1349 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 H7C1D1 291 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 TRAF5O00463 557 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 ATP1A1P05023 1023 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 PAFAH1B1P43034 410 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 NOP2P46087 812 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 PMS1P54277 932 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 TMEM266Q2M3C6 531 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 MAP9Q49MG5 647 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-205ENST00000429411 SLC51AQ86UW1 340 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 RRP36Q96EU6 259 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 PYM1Q9BRP8 204 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 SEPT11Q9NVA2 429 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 SMARCAL1Q9NZC9 954 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 LRWD1Q9UFC0 647 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 NARFQ9UHQ1 456 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 RWDD2AQ9UIY3 292 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 FAM205AQ6ZU69 1335 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 H3BQF6 201 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 IRF6O14896 467 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 NTSR2O95665 410 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 SARSP49591 514 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 GNAQP50148 359 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 AMPD3Q01432 767 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 TBX2Q13207 712 aaPredicted RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 HLTFQ14527 1009 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-205ENST00000429411 NONOQ15233 471 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-205ENST00000429411 KCTD19Q17RG1 926 aaPredicted RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 NSUN4Q96CB9 384 aaKnown RBP8.97□□□□□ -0.97
HPS4-205ENST00000429411 EYA3Q99504 573 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 FAM204AQ9H8W3 233 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 TMEM260Q9NX78 707 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 PCDHA4Q9UN74 947 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 BRWD3Q6RI45 1802 aa8.97□□□□□ -0.97
HPS4-205ENST00000429411 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.97
HPS4-205ENST00000429411 TPD52L2O43399 206 aaKnown RBP8.96□□□□□ -0.97
HPS4-205ENST00000429411 TACC1O75410 805 aa8.96□□□□□ -0.97
HPS4-205ENST00000429411 UFL1O94874 794 aa8.96□□□□□ -0.97
HPS4-205ENST00000429411 SF3A3Q12874 501 aaKnown RBP eCLIP8.96□□□□□ -0.979e-7■■■■□ 22
HPS4-205ENST00000429411 PFKFB3Q16875 520 aaPredicted RBP8.96□□□□□ -0.97
HPS4-205ENST00000429411 MB21D1Q8N884 522 aa8.96□□□□□ -0.97
HPS4-205ENST00000429411 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.97
HPS4-205ENST00000429411 PIGSQ96S52 555 aa8.96□□□□□ -0.97
HPS4-205ENST00000429411 RIOK1Q9BRS2 568 aaKnown RBP8.96□□□□□ -0.97
HPS4-205ENST00000429411 IFIH1Q9BYX4 1025 aaKnown RBP8.96□□□□□ -0.97
HPS4-205ENST00000429411 BMP2KQ9NSY1 1161 aaPredicted RBP8.96□□□□□ -0.97
HPS4-205ENST00000429411 ARPP21Q9UBL0 812 aaPredicted RBP8.96□□□□□ -0.97
HPS4-205ENST00000429411 ZEB2O60315 1214 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 KIF4AO95239 1232 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 CYP2C19P33261 490 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 LONP1P36776 959 aaKnown RBP8.96□□□□□ -0.98
HPS4-205ENST00000429411 SV2BQ7L1I2 683 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 EGFL6Q8IUX8 553 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 TBCKQ8TEA7 893 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 FUT8Q9BYC5 575 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.96□□□□□ -0.98
HPS4-205ENST00000429411 TMCO5BA8MYB1 307 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 OR52Z1P0C646 297 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 FAM114A1Q8IWE2 563 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 SHISA4Q96DD7 197 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 CCDC51Q96ER9 411 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 MMS19Q96T76 1030 aa8.96□□□□□ -0.98
HPS4-205ENST00000429411 POTEMA6NI47 508 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 MOCS3O95396 460 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 PLEKP08567 350 aaPredicted RBP8.95□□□□□ -0.98
HPS4-205ENST00000429411 SLC16A2P36021 539 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 PTGER2P43116 358 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 MAGEA1P43355 309 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 DNM2P50570 870 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 RAPGEF1Q13905 1077 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 TRIM14Q14142 442 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 WHAMMP3Q1A5X7 153 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 KRT79Q5XKE5 535 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 REXO1Q8N1G1 1221 aaKnown RBP8.95□□□□□ -0.98
HPS4-205ENST00000429411 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 ALS2CR12Q96Q35 445 aa8.95□□□□□ -0.98
HPS4-205ENST00000429411 TSG101Q99816 390 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms