RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 LMBRD1Q9NUN5 540 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 ASTN1O14525 1302 aa10.89□□□□□ -0.67
HMGCLL1-206ENST00000428842 ICAM1P05362 532 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 EIF2AK2P19525 551 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 BAATQ14032 418 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 SAFBQ15424 915 aaKnown RBP eCLIP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 IL17AQ16552 155 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 TMEM63BQ5T3F8 832 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 TRMT1LQ7Z2T5 733 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 C12orf42Q96LP6 360 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 RNF146Q9NTX7 359 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 CTDP1Q9Y5B0 961 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 TLL2Q9Y6L7 1015 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 CDH23Q9H251 3354 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 CCNT1O60563 726 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 STAT3P40763 770 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 SPATA32Q96LK8 384 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 TAAR1Q96RJ0 339 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 PLIN2Q99541 437 aa10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 MOV10L1Q9BXT6 1211 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-206ENST00000428842 LOC285556D6RIA3 1793 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 CCDC194A0A1B0GVG4 234 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 CXCL11O14625 94 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 XBP1P17861 261 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 ERCC3P19447 782 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 SKOR2Q2VWA4 1001 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 POTEDQ86YR6 584 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 ARHGAP39Q9C0H5 1083 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 RIC8AQ9NPQ8 531 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 DOCK5Q9H7D0 1870 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 FAM86B1E9PN63 330 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 ZBED4O75132 1171 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 FAM86B2P0C5J1 330 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 LIG1P18858 919 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 ME1P48163 572 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 MRE11P49959 708 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 PTGDRQ13258 359 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 ZRSR1Q15695 479 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 CUL5Q93034 780 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 FOXP1Q9H334 677 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 GOLPH3LQ9H4A5 285 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 C6orf50Q9HD87 102 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 ABCB11O95342 1321 aa10.87□□□□□ -0.67
HMGCLL1-206ENST00000428842 A0A1B0GVL5 298 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 TBC1D8O95759 1140 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 PRKCSHP14314 528 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 ANO1Q5XXA6 986 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 SPATC1LQ9H0A9 340 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 PCDHA7Q9UN72 937 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 CETPP11597 493 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 MYCLP12524 364 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 CTGFP29279 349 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 NT5C2P49902 561 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 GTF2A2P52657 109 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 KRT85P78386 507 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 PTPAQ15257 358 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 CAMK4Q16566 473 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 TTC38Q5R3I4 469 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 PDILTQ8N807 584 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 LINC00301Q8NCQ3 95 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 ANO3Q9BYT9 981 aa10.86□□□□□ -0.67
HMGCLL1-206ENST00000428842 LCTP09848 1927 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 VWA3AA6NCI4 1184 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 SLC10A3P09131 477 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 SMARCA1P28370 1054 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 HOXA7P31268 230 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 CRHR2Q13324 411 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 STK38Q15208 465 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 CCDC148Q8NFR7 591 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 EPSTI1Q96J88 318 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 CAPNS2Q96L46 248 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 ZSCAN16Q9H4T2 348 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 HOXC10Q9NYD6 342 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 ZNFX1Q9P2E3 1918 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 VEGFBP49765 207 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 FKBP1BP68106 108 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 TAF1CQ15572 869 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 PRR16Q569H4 304 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 SYTL5Q8TDW5 730 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
HMGCLL1-206ENST00000428842 DDX39AO00148 427 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 TRPA1O75762 1119 aa10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 CASP1P29466 404 aa10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 GNA11P29992 359 aa10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 ERVK-24P63145 666 aa10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 SP4Q02446 784 aa10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 NONOQ15233 471 aaKnown RBP eCLIP10.84□□□□□ -0.67
HMGCLL1-206ENST00000428842 RNF207Q6ZRF8 634 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms