RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SMAD3P84022 425 aaKnown RBP20.02■□□□□ 0.8
TRIM39-209ENST00000428728 IMMTQ16891 758 aaKnown RBP20.02■□□□□ 0.8
TRIM39-209ENST00000428728 DGKHQ86XP1 1220 aa20.02■□□□□ 0.8
TRIM39-209ENST00000428728 UBA5Q9GZZ9 404 aa20.02■□□□□ 0.8
TRIM39-209ENST00000428728 IL25Q9H293 177 aa20.02■□□□□ 0.8
TRIM39-209ENST00000428728 KAT14Q9H8E8 782 aa20.02■□□□□ 0.8
TRIM39-209ENST00000428728 ZEB2O60315 1214 aa20.01■□□□□ 0.79
TRIM39-209ENST00000428728 PDE4AP27815 886 aa20.01■□□□□ 0.79
TRIM39-209ENST00000428728 RPS6P62753 249 aaKnown RBP20.01■□□□□ 0.79
TRIM39-209ENST00000428728 MFSD5Q6N075 450 aa20.01■□□□□ 0.79
TRIM39-209ENST00000428728 ENAHQ8N8S7 591 aaPredicted RBP20.01■□□□□ 0.79
TRIM39-209ENST00000428728 ZSCAN10Q96SZ4 725 aaPredicted RBP20.01■□□□□ 0.79
TRIM39-209ENST00000428728 PNMA2Q9UL42 364 aa20.01■□□□□ 0.79
TRIM39-209ENST00000428728 SCN10AQ9Y5Y9 1956 aa20.01■□□□□ 0.79
TRIM39-209ENST00000428728 TNKSO95271 1327 aa20.01■□□□□ 0.79
TRIM39-209ENST00000428728 SCN5AQ14524 2016 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 CABYRO75952 493 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 PSMC6P62333 389 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
TRIM39-209ENST00000428728 PDE4DQ08499 809 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 PPIGQ13427 754 aaKnown RBP eCLIP20■□□□□ 0.799e-8■□□□□ 10.3
TRIM39-209ENST00000428728 ITGA7Q13683 1181 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 CDC37Q16543 378 aaPredicted RBP20■□□□□ 0.79
TRIM39-209ENST00000428728 CCDC178Q5BJE1 867 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 BUD13Q9BRD0 619 aaKnown RBP eCLIP20■□□□□ 0.798e-8■■■□□ 15.1
TRIM39-209ENST00000428728 WDR11Q9BZH6 1224 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 CTNNA3Q9UI47 895 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 MYH7BA7E2Y1 1941 aa20■□□□□ 0.79
TRIM39-209ENST00000428728 TANC1Q9C0D5 1861 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 LOC102724159A0A0B4J2E5 919 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 CD4P01730 458 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 GSPT1P15170 499 aaKnown RBP19.99■□□□□ 0.79
TRIM39-209ENST00000428728 CSF2RAP15509 400 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 CYP2C18P33260 490 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 PWP2Q15269 919 aaKnown RBP19.99■□□□□ 0.79
TRIM39-209ENST00000428728 DUSP28Q4G0W2 176 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 TTC22Q5TAA0 569 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 TTYH1Q9H313 450 aaPredicted RBP19.99■□□□□ 0.79
TRIM39-209ENST00000428728 ZSWIM5Q9P217 1185 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 Q9Y3F1 56 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 GRIN2DO15399 1336 aa19.99■□□□□ 0.79
TRIM39-209ENST00000428728 DHX16O60231 1041 aaKnown RBP19.98■□□□□ 0.79
TRIM39-209ENST00000428728 NT5C2P49902 561 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 ASPRV1Q53RT3 343 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 TMEM199Q8N511 208 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 SLC43A3Q8NBI5 491 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 OR6J1Q8NGC5 347 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 MPHOSPH6Q99547 160 aaKnown RBP19.98■□□□□ 0.79
TRIM39-209ENST00000428728 CDX2Q99626 313 aaPredicted RBP19.98■□□□□ 0.79
TRIM39-209ENST00000428728 UBAC1Q9BSL1 405 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 KRT23Q9C075 422 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 SEMA6BQ9H3T3 888 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
TRIM39-209ENST00000428728 ACRP10323 421 aa19.97■□□□□ 0.79
TRIM39-209ENST00000428728 PPP2R5BQ15173 497 aa19.97■□□□□ 0.79
TRIM39-209ENST00000428728 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
TRIM39-209ENST00000428728 TRPV6Q9H1D0 765 aa19.97■□□□□ 0.79
TRIM39-209ENST00000428728 HIPK3Q9H422 1215 aa19.97■□□□□ 0.79
TRIM39-209ENST00000428728 UMODL1Q5DID0 1318 aa19.97■□□□□ 0.79
TRIM39-209ENST00000428728 BAZ2BQ9UIF8 2168 aaKnown RBP19.97■□□□□ 0.79
TRIM39-209ENST00000428728 DLL1O00548 723 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 B4GALT4O60513 344 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 MYL3P08590 195 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 PARP1P09874 1014 aaKnown RBP19.96■□□□□ 0.79
TRIM39-209ENST00000428728 TMEM240Q5SV17 173 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 DNERQ8NFT8 737 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 MYLIPQ8WY64 445 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 ANKS1AQ92625 1134 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 ABCB11O95342 1321 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 RAD50Q92878 1312 aa19.96■□□□□ 0.79
TRIM39-209ENST00000428728 RBM47A0AV96 593 aaKnown RBP19.95■□□□□ 0.78
TRIM39-209ENST00000428728 EDNRBP24530 442 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 DNAJB2P25686 324 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 CPT1AP50416 773 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 QRICH1Q2TAL8 776 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 IFIT1BQ5T764 474 aaKnown RBP19.95■□□□□ 0.78
TRIM39-209ENST00000428728 PSRC1Q6PGN9 363 aaPredicted RBP19.95■□□□□ 0.78
TRIM39-209ENST00000428728 ZNF365Q70YC5 407 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 C16orf59Q7L2K0 433 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 SCFD2Q8WU76 684 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 COPS5Q92905 334 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 VAT1LQ9HCJ6 419 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 POLR3EQ9NVU0 708 aa19.95■□□□□ 0.78
TRIM39-209ENST00000428728 TRIP12Q14669 1992 aaPredicted RBP19.95■□□□□ 0.78
TRIM39-209ENST00000428728 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.94■□□□□ 0.78
TRIM39-209ENST00000428728 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.94■□□□□ 0.78
TRIM39-209ENST00000428728 CCL23P55773 120 aa19.94■□□□□ 0.78
TRIM39-209ENST00000428728 PURAQ00577 322 aaKnown RBP19.94■□□□□ 0.78
TRIM39-209ENST00000428728 CYB5R4Q7L1T6 521 aa19.94■□□□□ 0.78
TRIM39-209ENST00000428728 TBC1D5Q92609 795 aa19.94■□□□□ 0.78
TRIM39-209ENST00000428728 NOC4LQ9BVI4 516 aaKnown RBP19.94■□□□□ 0.78
TRIM39-209ENST00000428728 MYO9BQ13459 2157 aa19.94■□□□□ 0.78
TRIM39-209ENST00000428728 B4DLN1 442 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 MRPL12P52815 198 aaKnown RBP19.93■□□□□ 0.78
TRIM39-209ENST00000428728 FAM47CQ5HY64 1035 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 FBXO11Q86XK2 927 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 STAG2Q8N3U4 1231 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 MAFAQ8NHW3 353 aaPredicted RBP19.93■□□□□ 0.78
TRIM39-209ENST00000428728 PPP1R13LQ8WUF5 828 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 ALDH8A1Q9H2A2 487 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms