RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 EYA2O00167 538 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 MASP2O00187 686 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 BBOX1O75936 387 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 GRK2P25098 689 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 GABREP78334 506 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 CTBSQ01459 385 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 PPFIA1Q13136 1202 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 PTPN14Q15678 1187 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 FAM196AQ6ZSG2 479 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 LRRTM3Q86VH5 581 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 TPH2Q8IWU9 490 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 ADAMTS18Q8TE60 1221 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 NKD1Q969G9 470 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 FAM210AQ96ND0 272 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 CNTNAP3BQ96NU0 1288 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 SMAD5Q99717 465 aaKnown RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 CNTNAP3Q9BZ76 1288 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 C11orf16Q9NQ32 467 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 TOPORSQ9NS56 1045 aaPredicted RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 CPSF2Q9P2I0 782 aaKnown RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 PFDN2Q9UHV9 154 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 SALL4Q9UJQ4 1053 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 RAD54L2Q9Y4B4 1467 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 RSF1Q96T23 1441 aaPredicted RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 F5H423 210 aaPredicted RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 APBA3O96018 575 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 KCNA6P17658 529 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 CBX2Q14781 532 aaPredicted RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 INAVAQ3KP66 663 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 ATP13A4Q4VNC1 1196 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 ARMC4Q5T2S8 1044 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 AGAP9Q5VTM2 703 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 MILR1Q7Z6M3 343 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 HDAC2Q92769 488 aaKnown RBP4.1□□□□□ -1.75
CCDC30-203ENST00000428554 CLIP3Q96DZ5 547 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 HELLSQ9NRZ9 838 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 SUN2Q9UH99 717 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 GIT1Q9Y2X7 761 aa4.1□□□□□ -1.75
CCDC30-203ENST00000428554 FOXN3O00409 490 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 TERTO14746 1132 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 KRT1P04264 644 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 IFIT1P09914 478 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 BPIP17213 487 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 VCAM1P19320 739 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 UBXN2AP68543 259 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 LMNB2Q03252 620 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 PTPN21Q16825 1174 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 SLC10A6Q3KNW5 377 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 FAAH2Q6GMR7 532 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 RASGRP2Q7LDG7 609 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 CATSPER4Q7RTX7 472 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 MYLK4Q86YV6 388 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 COLGALT2Q8IYK4 626 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 VWA5B2Q8N398 1253 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 CNTD1Q8N815 330 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 SGCZQ96LD1 299 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 NSUN5Q96P11 429 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 PNMA5Q96PV4 448 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 HHIPQ96QV1 700 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 MRPL4Q9BYD3 311 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 WDR12Q9GZL7 423 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 C1orf112Q9NSG2 853 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 CDC14CA4D256 554 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 C2CD2LO14523 706 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 KIF1CO43896 1103 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 CD4P01730 458 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 FGFR3P22607 806 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 XPAP23025 273 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 GBP2P32456 591 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 UBASH3AP57075 661 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 MLLT1Q03111 559 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 BTKQ06187 659 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 CPA6Q8N4T0 437 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 SLC16A10Q8TF71 515 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 CLUHP3Q96NS8 147 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 EIF2AK1Q9BQI3 630 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 TNKS2Q9H2K2 1166 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 SUV39H2Q9H5I1 410 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 TLR7Q9NYK1 1049 aaKnown RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 GIMAP2Q9UG22 337 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 TBK1Q9UHD2 729 aa4.09□□□□□ -1.75
CCDC30-203ENST00000428554 ATXN7L1Q9ULK2 861 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 MAGED1Q9Y5V3 778 aaPredicted RBP4.09□□□□□ -1.75
CCDC30-203ENST00000428554 ZBTB42B2RXF5 422 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 M0R3H8 397 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 IPO8O15397 1037 aaKnown RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 USP2O75604 605 aaPredicted RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 MBD4O95243 580 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 CYP11A1P05108 521 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 MCM4P33991 863 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 TNNT2P45379 298 aaPredicted RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 SEPT6Q14141 434 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 TATDN1Q6P1N9 297 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 B3GNT9Q6UX72 402 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 CCBE1Q6UXH8 406 aaPredicted RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 DHX32Q7L7V1 743 aaKnown RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 SDCCAG8Q86SQ7 713 aaPredicted RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 DZIP1LQ8IYY4 767 aaKnown RBP4.08□□□□□ -1.76
CCDC30-203ENST00000428554 PHC3Q8NDX5 983 aa4.08□□□□□ -1.76
CCDC30-203ENST00000428554 RSAD2Q8WXG1 361 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms