RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 FGRP09769 529 aa19.53■□□□□ 0.72
VARS-216ENST00000428445 MYOGP15173 224 aa19.53■□□□□ 0.72
VARS-216ENST00000428445 CALML3P27482 149 aa19.53■□□□□ 0.72
VARS-216ENST00000428445 ALDH5A1P51649 535 aaPredicted RBP19.53■□□□□ 0.72
VARS-216ENST00000428445 PDE1AP54750 535 aa19.53■□□□□ 0.72
VARS-216ENST00000428445 SLC30A10Q6XR72 485 aa19.53■□□□□ 0.72
VARS-216ENST00000428445 ZNF589Q86UQ0 364 aaPredicted RBP19.53■□□□□ 0.72
VARS-216ENST00000428445 TRMT13Q9NUP7 481 aaKnown RBP19.53■□□□□ 0.72
VARS-216ENST00000428445 ZEB2O60315 1214 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 CABYRO75952 493 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 CYP2C9P11712 490 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 ALX1Q15699 326 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 PPP4R3BQ5MIZ7 849 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 BTNL9Q6UXG8 535 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 MORC4Q8TE76 937 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 CLEC4DQ8WXI8 215 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 WDR11Q9BZH6 1224 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 CPVLQ9H3G5 476 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 VTA1Q9NP79 307 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 HELLSQ9NRZ9 838 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 SCN5AQ14524 2016 aa19.52■□□□□ 0.72
VARS-216ENST00000428445 MYL3P08590 195 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 HSPD1P10809 573 aaKnown RBP19.51■□□□□ 0.71
VARS-216ENST00000428445 TOP1P11387 765 aaKnown RBP19.51■□□□□ 0.71
VARS-216ENST00000428445 IGFBP4P22692 258 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 NMIQ13287 307 aaPredicted RBP19.51■□□□□ 0.71
VARS-216ENST00000428445 MCMDC2Q4G0Z9 681 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 COPS5Q92905 334 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 GAS2L1Q99501 681 aaPredicted RBP19.51■□□□□ 0.71
VARS-216ENST00000428445 ZKSCAN3Q9BRR0 538 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 ALDH8A1Q9H2A2 487 aaPredicted RBP19.51■□□□□ 0.71
VARS-216ENST00000428445 MSRAQ9UJ68 235 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 Q9Y3F1 56 aa19.51■□□□□ 0.71
VARS-216ENST00000428445 CHD7Q9P2D1 2997 aa19.5■□□□□ 0.71
VARS-216ENST00000428445 PDHBP11177 359 aa19.5■□□□□ 0.71
VARS-216ENST00000428445 RRP1P56182 461 aaKnown RBP19.5■□□□□ 0.71
VARS-216ENST00000428445 DUSP28Q4G0W2 176 aa19.5■□□□□ 0.71
VARS-216ENST00000428445 ZBTB47Q9UFB7 747 aaPredicted RBP19.5■□□□□ 0.71
VARS-216ENST00000428445 REV3LO60673 3130 aa19.49■□□□□ 0.71
VARS-216ENST00000428445 GOLGA8HP0CJ92 632 aa19.49■□□□□ 0.71
VARS-216ENST00000428445 DEFB128Q7Z7B8 93 aa19.49■□□□□ 0.71
VARS-216ENST00000428445 TBC1D10CQ8IV04 446 aa19.49■□□□□ 0.71
VARS-216ENST00000428445 OR6J1Q8NGC5 347 aa19.49■□□□□ 0.71
VARS-216ENST00000428445 ZBBXA8MT70 800 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 PURAQ00577 322 aaKnown RBP19.48■□□□□ 0.71
VARS-216ENST00000428445 TTLL4Q14679 1199 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 TJAP1Q5JTD0 557 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 RNF207Q6ZRF8 634 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 TBC1D5Q92609 795 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 RILPL2Q969X0 211 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 UBA5Q9GZZ9 404 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 TCP11L1Q9NUJ3 509 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 ADD3Q9UEY8 706 aaKnown RBP19.48■□□□□ 0.71
VARS-216ENST00000428445 MUC3AQ02505 3323 aa19.48■□□□□ 0.71
VARS-216ENST00000428445 RBM47A0AV96 593 aaKnown RBP19.47■□□□□ 0.71
VARS-216ENST00000428445 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 RPS6P62753 249 aaKnown RBP19.47■□□□□ 0.71
VARS-216ENST00000428445 ZNF543Q08ER8 600 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 RAB30Q15771 203 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 NBPF20Q3BBV1 942 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 USH1GQ495M9 461 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 FAM47CQ5HY64 1035 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 TICAM2Q86XR7 235 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 SYMPKQ92797 1274 aaKnown RBP19.47■□□□□ 0.71
VARS-216ENST00000428445 SLC28A3Q9HAS3 691 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 TTC28Q96AY4 2481 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 TNKSO95271 1327 aa19.47■□□□□ 0.71
VARS-216ENST00000428445 RFXAPO00287 272 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 AKNAD1Q5T1N1 836 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 B4GALNT3Q6L9W6 998 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 MFSD6Q6ZSS7 791 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 SLC4A7Q9Y6M7 1214 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 NEDD4P46934 1319 aa19.46■□□□□ 0.71
VARS-216ENST00000428445 ARIH2O95376 493 aa19.45■□□□□ 0.7
VARS-216ENST00000428445 PDE4DQ08499 809 aa19.45■□□□□ 0.7
VARS-216ENST00000428445 RPUSD2Q8IZ73 545 aaKnown RBP19.45■□□□□ 0.7
VARS-216ENST00000428445 MICALL1Q8N3F8 863 aa19.45■□□□□ 0.7
VARS-216ENST00000428445 MTG1Q9BT17 334 aaPredicted RBP19.45■□□□□ 0.7
VARS-216ENST00000428445 MTIF3Q9H2K0 278 aaKnown RBP19.45■□□□□ 0.7
VARS-216ENST00000428445 CERS4Q9HA82 394 aa19.45■□□□□ 0.7
VARS-216ENST00000428445 POLR3EQ9NVU0 708 aa19.45■□□□□ 0.7
VARS-216ENST00000428445 CCDC171Q6TFL3 1326 aa19.45■□□□□ 0.7
VARS-216ENST00000428445 TRIP12Q14669 1992 aaPredicted RBP19.44■□□□□ 0.7
VARS-216ENST00000428445 CPT1AP50416 773 aa19.44■□□□□ 0.7
VARS-216ENST00000428445 GPHNQ9NQX3 736 aaPredicted RBP19.44■□□□□ 0.7
VARS-216ENST00000428445 TCF20Q9UGU0 1960 aaKnown RBP19.44■□□□□ 0.7
VARS-216ENST00000428445 TET1Q8NFU7 2136 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 SCN10AQ9Y5Y9 1956 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 SNHG28P0DPA3 235 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 TXNP10599 105 aaKnown RBP19.43■□□□□ 0.7
VARS-216ENST00000428445 ATP2A2P16615 1042 aaKnown RBP19.43■□□□□ 0.7
VARS-216ENST00000428445 EDNRBP24530 442 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
VARS-216ENST00000428445 PPP2R5BQ15173 497 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 PPP2R2DQ66LE6 453 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 TTC14Q96N46 770 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 SEZ6LQ9BYH1 1024 aa19.43■□□□□ 0.7
VARS-216ENST00000428445 SUPT20HL2P0C7V6 817 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms