RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 MEA1Q16626 185 aa16■□□□□ 0.15
LIG1-202ENST00000427526 AK8Q96MA6 479 aa16■□□□□ 0.15
LIG1-202ENST00000427526 TTYH3Q9C0H2 523 aa16■□□□□ 0.15
LIG1-202ENST00000427526 TRIM10Q9UDY6 481 aa16■□□□□ 0.15
LIG1-202ENST00000427526 MTMR7Q9Y216 660 aa16■□□□□ 0.15
LIG1-202ENST00000427526 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
LIG1-202ENST00000427526 CTAGE15A4D2H0 777 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 RASSF10A6NK89 507 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 PSMD14O00487 310 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 CTAGE8P0CG41 777 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 RASA1P20936 1047 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 DNM2P50570 870 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 CTAGE4Q8IX94 777 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 RASSF8Q8NHQ8 419 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 NOC3LQ8WTT2 800 aaKnown RBP15.99■□□□□ 0.15
LIG1-202ENST00000427526 TRIM47Q96LD4 638 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 LZTS2Q9BRK4 669 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 HAUS4Q9H6D7 363 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 MAGEF1Q9HAY2 307 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
LIG1-202ENST00000427526 GAKO14976 1311 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 H3BQF6 201 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 HERVK_113P62684 666 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 SPZ1Q9BXG8 430 aa15.99■□□□□ 0.15
LIG1-202ENST00000427526 PLCG1P19174 1290 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 CDK8P49336 464 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 TRAPPC11Q7Z392 1133 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 TRIM9Q9C026 710 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 ABCB6Q9NP58 842 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 GUCA1BQ9UMX6 200 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 KLRF2D3W0D1 207 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 GOLGA8HP0CJ92 632 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 PLCG2P16885 1265 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 LTBP1Q14766 1721 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 HDXQ7Z353 690 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 CABP7Q86V35 215 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 SLF2Q8IX21 1173 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 TUBGCP2Q9BSJ2 902 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
LIG1-202ENST00000427526 STX8Q9UNK0 236 aa15.98■□□□□ 0.15
LIG1-202ENST00000427526 B4DLN1 442 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 SCNN1DP51172 638 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 VSNL1P62760 191 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 PICALMQ13492 652 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
LIG1-202ENST00000427526 NOA1Q8NC60 698 aaKnown RBP15.97■□□□□ 0.15
LIG1-202ENST00000427526 C7orf25Q9BPX7 421 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 MAGEC2Q9UBF1 373 aaPredicted RBP15.97■□□□□ 0.15
LIG1-202ENST00000427526 OR52Z1P0C646 297 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 CCNE1P24864 410 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 ANKRD40Q6AI12 368 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 CERS3Q8IU89 383 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 CSGALNACT2Q8N6G5 542 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 AGPAT5Q9NUQ2 364 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 EXOC1Q9NV70 894 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 ERLIN1O75477 346 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 TUBBP07437 444 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 EN1Q05925 392 aaPredicted RBP15.97■□□□□ 0.15
LIG1-202ENST00000427526 STK4Q13043 487 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 KRT25Q7Z3Z0 450 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 RETREG2Q8NC44 543 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 P2RX5Q93086 422 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 MYH1P12882 1939 aa15.97■□□□□ 0.15
LIG1-202ENST00000427526 G3V3G9 751 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 CHRNA5P30532 468 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 POTEAQ6S8J7 498 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 C16orf86Q6ZW13 317 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 EYA3Q99504 573 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 NUP58Q9BVL2 599 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 TMX4Q9H1E5 349 aaPredicted RBP15.96■□□□□ 0.15
LIG1-202ENST00000427526 CPVLQ9H3G5 476 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 CALCOCO1Q9P1Z2 691 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 NAV1Q8NEY1 1877 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 GOLGB1Q14789 3259 aaKnown RBP15.96■□□□□ 0.15
LIG1-202ENST00000427526 WDR93Q6P2C0 686 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 MMTAG2Q9BU76 263 aaKnown RBP15.96■□□□□ 0.15
LIG1-202ENST00000427526 SUGCTQ9HAC7 445 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 ADAM21Q9UKJ8 722 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 TFR2Q9UP52 801 aa15.96■□□□□ 0.15
LIG1-202ENST00000427526 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.14
LIG1-202ENST00000427526 PES1O00541 588 aaKnown RBP15.95■□□□□ 0.14
LIG1-202ENST00000427526 CCNT1O60563 726 aaKnown RBP15.95■□□□□ 0.14
LIG1-202ENST00000427526 NAPAP54920 295 aa15.95■□□□□ 0.14
LIG1-202ENST00000427526 PDE4DQ08499 809 aa15.95■□□□□ 0.14
LIG1-202ENST00000427526 NONOQ15233 471 aaKnown RBP eCLIP15.95■□□□□ 0.14
LIG1-202ENST00000427526 TSR1Q2NL82 804 aaKnown RBP15.95■□□□□ 0.14
LIG1-202ENST00000427526 LETM2Q2VYF4 491 aa15.95■□□□□ 0.14
LIG1-202ENST00000427526 COBLL1Q53SF7 1204 aa15.95■□□□□ 0.14
LIG1-202ENST00000427526 MIIPQ5JXC2 388 aa15.95■□□□□ 0.14
LIG1-202ENST00000427526 PAPD7Q5XG87 772 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms