RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 PABPC4Q13310 644 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEB-209ENST00000427231 BAG1Q99933 345 aaPredicted RBP2.77□□□□□ -1.97
NEB-209ENST00000427231 NAPBQ9H115 298 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 NCOA1Q15788 1441 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 WDR7Q9Y4E6 1490 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 O00370 1275 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 ZNF662Q6ZS27 426 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 SRLQ86TD4 932 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 RABGGTAQ92696 567 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 NAT9Q9BTE0 207 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 ZC4H2Q9NQZ6 224 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 FKBP3Q00688 224 aaKnown RBP2.77□□□□□ -1.97
NEB-209ENST00000427231 SCRN1Q12765 414 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 LAMC2Q13753 1193 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 PI16Q6UXB8 463 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 TDRD7Q8NHU6 1098 aaKnown RBP2.77□□□□□ -1.97
NEB-209ENST00000427231 STAP2Q9UGK3 403 aa2.77□□□□□ -1.97
NEB-209ENST00000427231 KPNA2P52292 529 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 SLC7A5Q01650 507 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ENOX1Q8TC92 643 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 ZKSCAN3Q9BRR0 538 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 TEX12Q9BXU0 123 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 FAM135AQ9P2D6 1515 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 PFASO15067 1338 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MTSS1O43312 755 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 KLHL41O60662 606 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 HADHQ16836 314 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 FBF1Q8TES7 1133 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CEP44Q9C0F1 390 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 KDM4CQ9H3R0 1056 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CABP2Q9NPB3 220 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 PRDM11Q9NQV5 511 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 USP16Q9Y5T5 823 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 PYGLP06737 847 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 TAP1Q03518 808 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MIEF2Q96C03 454 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 KCNK9Q9NPC2 374 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MAPRE3Q9UPY8 281 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 SYNRGQ9UMZ2 1314 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ZPR1O75312 459 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CTCFP49711 727 aaPredicted RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 PDE6CP51160 858 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 TEX9Q8N6V9 391 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MKNK2Q9HBH9 465 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 DDX25Q9UHL0 483 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 B3GALNT1O75752 331 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 DTHD1Q6ZMT9 781 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 LPIN2Q92539 896 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 PDLIM2Q96JY6 352 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 FAM200BP0CF97 657 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 GNGT1P63211 74 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MED21Q13503 144 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 TJAP1Q5JTD0 557 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 FKBP9P1Q75LS8 142 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 SDCCAG8Q86SQ7 713 aaPredicted RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 CDKL2Q92772 493 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CAPS2Q9BXY5 557 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 HYOU1Q9Y4L1 999 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MROH5Q6ZUA9 1318 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ARHGAP10A1A4S6 786 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 DNM2P50570 870 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEB-209ENST00000427231 TSC22D4Q9Y3Q8 395 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CREBBPQ92793 2442 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CHUKO15111 745 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 LMOD1P29536 600 aaPredicted RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 SSRP1Q08945 709 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 GOLGA8FQ08AF8 430 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 GOLGA8DPQ0D2H9 430 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 HLTFQ14527 1009 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEB-209ENST00000427231 FBXO38Q6PIJ6 1188 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ANKRD13DQ6ZTN6 518 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 C8orf37Q96NL8 207 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 EPAS1Q99814 870 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ZBED2Q9BTP6 218 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 INTUQ9ULD6 942 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 FAM169AQ9Y6X4 670 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ZRANB2O95218 330 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEB-209ENST00000427231 FAM163BP0C2L3 166 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CABP4P57796 275 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 ADCY2Q08462 1091 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MRPL46Q9H2W6 279 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 CTTNBP2NLQ9P2B4 639 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 BBOX1O75936 387 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 SHQ1Q6PI26 577 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 MAEAQ7L5Y9 396 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 RFX7Q2KHR2 1363 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 WDR46O15213 610 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 DEXIO95424 95 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 TTKP33981 857 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 GSCP56915 257 aaPredicted RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 NOB1Q9ULX3 412 aaKnown RBP2.76□□□□□ -1.97
NEB-209ENST00000427231 PIK3C2GO75747 1445 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 BAG2O95816 211 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 CHMLP26374 656 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 PHBP35232 272 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 MAP3K7CLP57077 242 aa2.76□□□□□ -1.97
NEB-209ENST00000427231 KLHDC4Q8TBB5 520 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms