RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 ANO2Q9NQ90 1003 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 STARD7Q9NQZ5 370 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 PDGFCQ9NRA1 345 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 GNEQ9Y223 722 aaKnown RBP12.54□□□□□ -0.4
LINC01238-202ENST00000426962 DDX49Q9Y6V7 483 aaKnown RBP12.54□□□□□ -0.4
LINC01238-202ENST00000426962 MYADML2A6NDP7 307 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 SLC27A2O14975 620 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 ZBTB5O15062 677 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 DYNC1LI2O43237 492 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-202ENST00000426962 ASGR1P07306 291 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 SMPD1P17405 629 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 MCM5P33992 734 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 ANTXR2P58335 489 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-202ENST00000426962 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-202ENST00000426962 TLE2Q04725 743 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 TROAPQ12815 778 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 GRM4Q14833 912 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 FBXO16Q8IX29 292 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-202ENST00000426962 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 GLT1D1Q96MS3 346 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
LINC01238-202ENST00000426962 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 ELP1O95163 1332 aa12.53□□□□□ -0.4
LINC01238-202ENST00000426962 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
LINC01238-202ENST00000426962 CTAGE5O15320 804 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 ZEB2O60315 1214 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 EDNRBP24530 442 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 PDE4DQ08499 809 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 TRAF1Q13077 416 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 TLK2Q86UE8 772 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 TOX2Q96NM4 488 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
LINC01238-202ENST00000426962 MAP3K20Q9NYL2 800 aaKnown RBP12.52□□□□□ -0.41
LINC01238-202ENST00000426962 CEP290O15078 2479 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 DCDC2CA8MYV0 355 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 PRC1O43663 620 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 CDC45O75419 566 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 NEFLP07196 543 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 CDK7P50613 346 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 BEX3Q00994 111 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
LINC01238-202ENST00000426962 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 RNF20Q5VTR2 975 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 ANKRD33Q7Z3H0 272 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 SAMD3Q8N6K7 520 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
LINC01238-202ENST00000426962 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
LINC01238-202ENST00000426962 TAAR1Q96RJ0 339 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 IWS1Q96ST2 819 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 WDR11Q9BZH6 1224 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
LINC01238-202ENST00000426962 PDLIM7Q9NR12 457 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 PCDHA1Q9Y5I3 950 aa12.51□□□□□ -0.41
LINC01238-202ENST00000426962 MCM3APO60318 1980 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 A0A0U1RQG5 324 aaPredicted RBP12.5□□□□□ -0.41
LINC01238-202ENST00000426962 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 ARVCFO00192 962 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 CYTH3O43739 400 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
LINC01238-202ENST00000426962 CABYRO75952 493 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 CFBP00751 764 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 CLTBP09497 229 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 KIF5BP33176 963 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 LIFRP42702 1097 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 FAAP100Q0VG06 881 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 ZNF654Q8IZM8 581 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
LINC01238-202ENST00000426962 PIGSQ96S52 555 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 PCDH10Q9P2E7 1040 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
LINC01238-202ENST00000426962 SH2B2O14492 632 aaPredicted RBP12.49□□□□□ -0.41
LINC01238-202ENST00000426962 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 NKRFO15226 690 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01238-202ENST00000426962 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
LINC01238-202ENST00000426962 DDAH1O94760 285 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 GHRHRQ02643 423 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 STXBP2Q15833 593 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 LRIT3Q3SXY7 679 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
LINC01238-202ENST00000426962 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms