RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 IQSEC1Q6DN90 963 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 SLC30A10Q6XR72 485 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 NOL8Q76FK4 1167 aaKnown RBP11.84□□□□□ -0.51
GACAT3-201ENST00000426539 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
GACAT3-201ENST00000426539 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 PPP1R12CQ9BZL4 782 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
GACAT3-201ENST00000426539 NEDD4P46934 1319 aa11.84□□□□□ -0.51
GACAT3-201ENST00000426539 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.83□□□□□ -0.52
GACAT3-201ENST00000426539 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.83□□□□□ -0.52
GACAT3-201ENST00000426539 ACRP10323 421 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 ALDH5A1P51649 535 aaPredicted RBP11.83□□□□□ -0.52
GACAT3-201ENST00000426539 PSMC6P62333 389 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 ITGA7Q13683 1181 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 TTC14Q96N46 770 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 VTA1Q9NP79 307 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 Q9Y3F1 56 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 LCTP09848 1927 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 LAMA2P24043 3122 aaKnown RBP11.83□□□□□ -0.52
GACAT3-201ENST00000426539 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
GACAT3-201ENST00000426539 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 GRXCR1A8MXD5 290 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 TLR3O15455 904 aaKnown RBP11.82□□□□□ -0.52
GACAT3-201ENST00000426539 CABYRO75952 493 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 PCP11498 1178 aaKnown RBP11.82□□□□□ -0.52
GACAT3-201ENST00000426539 DNAJB2P25686 324 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 CYP2C18P33260 490 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 NUCB1Q02818 461 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 PPIGQ13427 754 aaKnown RBP eCLIP11.82□□□□□ -0.52
GACAT3-201ENST00000426539 GRIN2CQ14957 1233 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 KIAA1211Q6ZU35 1233 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 ZNF365Q70YC5 407 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 MAFAQ8NHW3 353 aaPredicted RBP11.82□□□□□ -0.52
GACAT3-201ENST00000426539 ZKSCAN3Q9BRR0 538 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
GACAT3-201ENST00000426539 AP5M1Q9H0R1 490 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 TRPV6Q9H1D0 765 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 CPVLQ9H3G5 476 aa11.82□□□□□ -0.52
GACAT3-201ENST00000426539 RWDD1Q9H446 243 aaPredicted RBP11.82□□□□□ -0.52
GACAT3-201ENST00000426539 RBM47A0AV96 593 aaKnown RBP11.81□□□□□ -0.52
GACAT3-201ENST00000426539 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 B4GALT4O60513 344 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 EDNRBP24530 442 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 PBX2P40425 430 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 AAMPQ13685 434 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 DUSP28Q4G0W2 176 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 VWCEQ96DN2 955 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 WDR19Q8NEZ3 1342 aa11.81□□□□□ -0.52
GACAT3-201ENST00000426539 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 ZEB2O60315 1214 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 FOSL2P15408 326 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 CALML3P27482 149 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 RPS6P62753 249 aaKnown RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 RNF207Q6ZRF8 634 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 DGKHQ86XP1 1220 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 ESR2Q92731 530 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 TIFAQ96CG3 184 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 PBX4Q9BYU1 374 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 WNT8AQ9H1J5 351 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 IL25Q9H293 177 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 HIPK3Q9H422 1215 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 IL23AQ9NPF7 189 aa11.8□□□□□ -0.52
GACAT3-201ENST00000426539 CXXC1Q9P0U4 656 aaPredicted RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
GACAT3-201ENST00000426539 ZNF213O14771 459 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 KDM4AO75164 1064 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 CCL23P55773 120 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 PURAQ00577 322 aaKnown RBP11.79□□□□□ -0.52
GACAT3-201ENST00000426539 PSRC1Q6PGN9 363 aaPredicted RBP11.79□□□□□ -0.52
GACAT3-201ENST00000426539 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 HERVK_113Q902F9 699 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 TBC1D5Q92609 795 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 COPS5Q92905 334 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 ALDH8A1Q9H2A2 487 aaPredicted RBP11.79□□□□□ -0.52
GACAT3-201ENST00000426539 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
GACAT3-201ENST00000426539 A0A0C4DFX4 3053 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 B4E1Z4 1266 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 ARIH2O95376 493 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 MFAP1P55081 439 aaKnown RBP11.78□□□□□ -0.52
GACAT3-201ENST00000426539 USH1GQ495M9 461 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 GPATCH4Q5T3I0 446 aaKnown RBP11.78□□□□□ -0.52
GACAT3-201ENST00000426539 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
GACAT3-201ENST00000426539 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
GACAT3-201ENST00000426539 PNMA1Q8ND90 353 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms