RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 WNT10BO00744 389 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 TLR2O60603 784 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 FRAT2O75474 233 aaPredicted RBP7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 GNAI3P08754 354 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 IFIT1P09914 478 aaKnown RBP7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 TRIM27P14373 513 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 CAPN2P17655 700 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 FKBP1AP62942 108 aaKnown RBP7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 SFSWAPQ12872 951 aaKnown RBP7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 CCINQ13939 588 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 DLGAP5Q15398 846 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 TSNAXIP1Q2TAA8 658 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 ZKSCAN2Q63HK3 967 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 FAM43AQ8N2R8 423 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 CERS5Q8N5B7 392 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 BRI3BPQ8WY22 251 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 CCDC74AQ96AQ1 378 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 OPTNQ96CV9 577 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 MEIS3Q99687 375 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 LBHD1Q9BQE6 289 aaPredicted RBP7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 RNF19AQ9NV58 838 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 TNNQ9UQP3 1299 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 CDH23Q9H251 3354 aa7.63□□□□□ -1.19
NIF3L1-207ENST00000426253 MUC6Q6W4X9 2439 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 FAM86C2PA6NEL3 165 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 KHNYNO15037 678 aaKnown RBP7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 MAPTP10636 758 aaKnown RBP7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 CTGFP29279 349 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 RBM5P52756 815 aaKnown RBP eCLIP7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 PRKCZQ05513 592 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 MAP3K11Q16584 847 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 TTC39BQ5VTQ0 682 aaPredicted RBP7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 ATG9AQ7Z3C6 839 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 VGLL2Q8N8G2 317 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 IRX2Q9BZI1 471 aaPredicted RBP7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 SIL1Q9H173 461 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 C11orf49Q9H6J7 331 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 MARK1Q9P0L2 795 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 SPEF2Q9C093 1822 aa7.62□□□□□ -1.19
NIF3L1-207ENST00000426253 ZBED9Q6R2W3 1325 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 SCAMP3O14828 347 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 BNIP3LO60238 219 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 CIAO1O76071 339 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 GNAI2P04899 355 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 FGFR2P21802 821 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 IL15P40933 162 aaPredicted RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 GTF2A2P52657 109 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 CHAF1AQ13111 956 aaPredicted RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 PUM3Q15397 648 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 CFAP100Q494V2 611 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 MFSD14BQ5SR56 506 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 GALNT12Q8IXK2 581 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 ANKRD13AQ8IZ07 590 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 C1orf127Q8N9H9 656 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 LPIN2Q92539 896 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 ZBED3Q96IU2 234 aaPredicted RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 PRMT6Q96LA8 375 aaPredicted RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 CHRDQ9H2X0 955 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 COPRSQ9NQ92 184 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 CPA4Q9UI42 421 aa7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 TTF2Q9UNY4 1162 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 PA2G4Q9UQ80 394 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 DDX60LQ5H9U9 1706 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-207ENST00000426253 SRGAP3O43295 1099 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 MYO1BO43795 1136 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 ADCY3O60266 1144 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 SASH3O75995 380 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 SLC5A1P13866 664 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 ELNP15502 786 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 TARSP26639 723 aaKnown RBP7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 TMEM57Q8N5G2 664 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 TMEM87AQ8NBN3 555 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 DEFB129Q9H1M3 183 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 CUEDC1Q9NWM3 386 aaPredicted RBP7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 VTI1BQ9UEU0 232 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 ATXN7L1Q9ULK2 861 aaPredicted RBP7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 PCDHAC2Q9Y5I4 1007 aa7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 TCF20Q9UGU0 1960 aaKnown RBP7.6□□□□□ -1.19
NIF3L1-207ENST00000426253 ADGRA2Q96PE1 1338 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 CES1P23141 567 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 TIMM10P62072 90 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 NHLH1Q02575 133 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 G3BP1Q13283 466 aaKnown RBP eCLIP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 ATP2B3Q16720 1220 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 SUPT20HL1Q3ZLR7 823 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 FTSJ3Q8IY81 847 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 DZIP1LQ8IYY4 767 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 OR13H1Q8NG92 308 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 TBC1D22AQ8WUA7 517 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 MRIQ9BWK5 157 aa7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 PAK6Q9NQU5 681 aaPredicted RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 METTL5Q9NRN9 209 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 GNL3LQ9NVN8 582 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 GMPR2Q9P2T1 348 aaKnown RBP7.59□□□□□ -1.19
NIF3L1-207ENST00000426253 PHF24Q9UPV7 400 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms