RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
UBR4-207ENST00000425413 B4DLN1 442 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 H0YIN7 160 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 CCDC175P0C221 793 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 SLC1A4P43007 532 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 RAD51AP2Q09MP3 1159 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
UBR4-207ENST00000425413 CT47A1Q5JQC4 288 aaPredicted RBP12.97□□□□□ -0.33
UBR4-207ENST00000425413 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 SNX29Q8TEQ0 813 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 PCMTD1Q96MG8 357 aaPredicted RBP12.97□□□□□ -0.33
UBR4-207ENST00000425413 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 L2HGDHQ9H9P8 463 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
UBR4-207ENST00000425413 KLK7P49862 253 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 GRB10Q13322 594 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 LRRC41Q15345 812 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 USH1GQ495M9 461 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 ANKRD40Q6AI12 368 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 KCNK18Q7Z418 384 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
UBR4-207ENST00000425413 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SWAP70Q9UH65 585 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 ADGRG1Q9Y653 693 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 H7C1D1 291 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 RHOBTB3O94955 611 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SNHG28P0DPA3 235 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 ERVK-24P63145 666 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SPAG1Q07617 926 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 FCHSD1Q86WN1 690 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.33
UBR4-207ENST00000425413 AK8Q96MA6 479 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 CHP1Q99653 195 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
UBR4-207ENST00000425413 TFR2Q9UP52 801 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 SUGT1Q9Y2Z0 365 aa12.96□□□□□ -0.33
UBR4-207ENST00000425413 MYMKA6NI61 221 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 TFRCP02786 760 aaKnown RBP12.96□□□□□ -0.34
UBR4-207ENST00000425413 NOVP48745 357 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 QRICH1Q2TAL8 776 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 CCDC93Q567U6 631 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 PODNQ7Z5L7 613 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 CNGA4Q8IV77 575 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 GLIS3Q8NEA6 775 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.34
UBR4-207ENST00000425413 PCDHA1Q9Y5I3 950 aa12.96□□□□□ -0.34
UBR4-207ENST00000425413 PHLPP2Q6ZVD8 1323 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 ZBTB5O15062 677 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
UBR4-207ENST00000425413 SLFN13Q68D06 897 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 TTI2Q6NXR4 508 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 SV2BQ7L1I2 683 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 CUL5Q93034 780 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
UBR4-207ENST00000425413 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 PNMA5Q96PV4 448 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 MTMR9Q96QG7 549 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 DUSP9Q99956 384 aaKnown RBP12.95□□□□□ -0.34
UBR4-207ENST00000425413 ABHD10Q9NUJ1 306 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 BLOC1S4Q9NUP1 217 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 CGNQ9P2M7 1197 aaKnown RBP12.95□□□□□ -0.34
UBR4-207ENST00000425413 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 MTIF2P46199 727 aaKnown RBP12.95□□□□□ -0.34
UBR4-207ENST00000425413 KCNB1Q14721 858 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 ECM1Q16610 540 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 DACT2Q5SW24 774 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 PDGFDQ9GZP0 370 aaPredicted RBP12.95□□□□□ -0.34
UBR4-207ENST00000425413 SRCAPQ6ZRS2 3230 aa12.95□□□□□ -0.34
UBR4-207ENST00000425413 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 LRRC10BA6NIK2 292 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 C21orf2O43822 256 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 JAG1P78504 1218 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 ICA1Q05084 483 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 ZNF569Q5MCW4 686 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 KRT79Q5XKE5 535 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 KIAA0895Q8NCT3 520 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 UBXN4Q92575 508 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 P2RX5Q93086 422 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 RIC8AQ9NPQ8 531 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 STAT3P40763 770 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
UBR4-207ENST00000425413 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 MB21D1Q8N884 522 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 LARP4BQ92615 738 aaKnown RBP12.94□□□□□ -0.34
UBR4-207ENST00000425413 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
UBR4-207ENST00000425413 TUBGCP2Q9BSJ2 902 aa12.94□□□□□ -0.34
UBR4-207ENST00000425413 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms