RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
ATG4B-209ENST00000425239 TICAM2Q86XR7 235 aa17.7■□□□□ 0.42
ATG4B-209ENST00000425239 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
ATG4B-209ENST00000425239 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
ATG4B-209ENST00000425239 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
ATG4B-209ENST00000425239 PDHBP11177 359 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 TOP1P11387 765 aaKnown RBP17.69■□□□□ 0.42
ATG4B-209ENST00000425239 CCL23P55773 120 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
ATG4B-209ENST00000425239 SYDE2Q5VT97 1194 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 ZNF589Q86UQ0 364 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-209ENST00000425239 ALDH8A1Q9H2A2 487 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-209ENST00000425239 PRDM12Q9H4Q4 367 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
ATG4B-209ENST00000425239 EDNRBP24530 442 aa17.68■□□□□ 0.42
ATG4B-209ENST00000425239 PURAQ00577 322 aaKnown RBP17.68■□□□□ 0.42
ATG4B-209ENST00000425239 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
ATG4B-209ENST00000425239 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
ATG4B-209ENST00000425239 OTOP2Q7RTS6 562 aa17.68■□□□□ 0.42
ATG4B-209ENST00000425239 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
ATG4B-209ENST00000425239 ZEB2O60315 1214 aa17.67■□□□□ 0.42
ATG4B-209ENST00000425239 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-209ENST00000425239 SLC30A10Q6XR72 485 aa17.67■□□□□ 0.42
ATG4B-209ENST00000425239 SYMPKQ92797 1274 aaKnown RBP17.67■□□□□ 0.42
ATG4B-209ENST00000425239 TTC14Q96N46 770 aa17.67■□□□□ 0.42
ATG4B-209ENST00000425239 GPCPD1Q9NPB8 672 aa17.67■□□□□ 0.42
ATG4B-209ENST00000425239 TRMT13Q9NUP7 481 aaKnown RBP17.67■□□□□ 0.42
ATG4B-209ENST00000425239 ADD3Q9UEY8 706 aaKnown RBP17.67■□□□□ 0.42
ATG4B-209ENST00000425239 SCN10AQ9Y5Y9 1956 aa17.67■□□□□ 0.42
ATG4B-209ENST00000425239 FRMPD2Q68DX3 1309 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-209ENST00000425239 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
ATG4B-209ENST00000425239 ZNF543Q08ER8 600 aa17.66■□□□□ 0.42
ATG4B-209ENST00000425239 RAB30Q15771 203 aa17.66■□□□□ 0.42
ATG4B-209ENST00000425239 CCDC96Q2M329 555 aa17.66■□□□□ 0.42
ATG4B-209ENST00000425239 TJAP1Q5JTD0 557 aa17.66■□□□□ 0.42
ATG4B-209ENST00000425239 SCLYQ96I15 445 aa17.66■□□□□ 0.42
ATG4B-209ENST00000425239 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
ATG4B-209ENST00000425239 A6NJR5 290 aa17.65■□□□□ 0.42
ATG4B-209ENST00000425239 RPS6P62753 249 aaKnown RBP17.65■□□□□ 0.42
ATG4B-209ENST00000425239 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-209ENST00000425239 TBC1D10CQ8IV04 446 aa17.65■□□□□ 0.42
ATG4B-209ENST00000425239 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
ATG4B-209ENST00000425239 SCN5AQ14524 2016 aa17.65■□□□□ 0.42
ATG4B-209ENST00000425239 CYP2C9P11712 490 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 MYOGP15173 224 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 RABGGTBP53611 331 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 HAND2P61296 217 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 TTLL4Q14679 1199 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 RRP12Q5JTH9 1297 aaKnown RBP17.64■□□□□ 0.41
ATG4B-209ENST00000425239 RNF207Q6ZRF8 634 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 RPUSD2Q8IZ73 545 aaKnown RBP17.64■□□□□ 0.41
ATG4B-209ENST00000425239 RGS22Q8NE09 1264 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 ATXN2LQ8WWM7 1075 aaKnown RBP17.64■□□□□ 0.41
ATG4B-209ENST00000425239 GAS2L1Q99501 681 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-209ENST00000425239 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 MSRAQ9UJ68 235 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 WDR19Q8NEZ3 1342 aa17.64■□□□□ 0.41
ATG4B-209ENST00000425239 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 CALML3P27482 149 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 NBPF20Q3BBV1 942 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 DNERQ8NFT8 737 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 COPS5Q92905 334 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 CTAGE1Q96RT6 745 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 TNKSO95271 1327 aa17.63■□□□□ 0.41
ATG4B-209ENST00000425239 ARIH2O95376 493 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
ATG4B-209ENST00000425239 CPT1AP50416 773 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 PPP1R13LQ8WUF5 828 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 ASB2Q96Q27 587 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 MTG1Q9BT17 334 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-209ENST00000425239 CPVLQ9H3G5 476 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 SLC28A3Q9HAS3 691 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 PCDHA11Q9Y5I1 949 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 SLC4A7Q9Y6M7 1214 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
ATG4B-209ENST00000425239 NKRFO15226 690 aaKnown RBP eCLIP17.61■□□□□ 0.419e-11■■□□□ 11.5
ATG4B-209ENST00000425239 MYL3P08590 195 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 SUPT20HL2P0C7V6 817 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 GPNMBQ14956 572 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 NFRKBQ6P4R8 1299 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 MFSD6Q6ZSS7 791 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 DGKHQ86XP1 1220 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 OR6J1Q8NGC5 347 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 ANKS1AQ92625 1134 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 MTIF3Q9H2K0 278 aaKnown RBP17.61■□□□□ 0.41
ATG4B-209ENST00000425239 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 NEDD4P46934 1319 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 BDP1A6H8Y1 2624 aa17.61■□□□□ 0.41
ATG4B-209ENST00000425239 PFKMP08237 780 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 SDSP20132 328 aa17.6■□□□□ 0.41
ATG4B-209ENST00000425239 POU3F3P20264 500 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms