RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 FMR1NBQ8N0W7 255 aaPredicted RBP17.05■□□□□ 0.32
CALD1-206ENST00000424922 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
CALD1-206ENST00000424922 MCM7P33993 719 aa17.04■□□□□ 0.32
CALD1-206ENST00000424922 ZNF165P49910 485 aa17.04■□□□□ 0.32
CALD1-206ENST00000424922 TRAF1Q13077 416 aa17.04■□□□□ 0.32
CALD1-206ENST00000424922 STX1AQ16623 288 aa17.04■□□□□ 0.32
CALD1-206ENST00000424922 LUZP1Q86V48 1076 aa17.04■□□□□ 0.32
CALD1-206ENST00000424922 SPDYE5A6NIY4 337 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
CALD1-206ENST00000424922 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.03■□□□□ 0.32
CALD1-206ENST00000424922 TBCKQ8TEA7 893 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 AGBL1Q96MI9 1066 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 TRPM7Q96QT4 1865 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 ZNF536O15090 1300 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 MEIS2O14770 477 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 OPLAHO14841 1288 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 ICAM1P05362 532 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 LDLRAD1Q5T700 205 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 CLIC6Q96NY7 704 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 SLC38A10Q9HBR0 1119 aa17.03■□□□□ 0.32
CALD1-206ENST00000424922 BMP15O95972 392 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 TPM2P07951 284 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 PTGDRQ13258 359 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 LETM2Q2VYF4 491 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 CATSPERGQ6ZRH7 1159 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 NEK8Q86SG6 692 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 KRI1Q8N9T8 703 aaKnown RBP17.02■□□□□ 0.32
CALD1-206ENST00000424922 OPTNQ96CV9 577 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 ATG4CQ96DT6 458 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 DNAJC25Q9H1X3 360 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 ANO10Q9NW15 660 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 CCPG1Q9ULG6 757 aa17.02■□□□□ 0.32
CALD1-206ENST00000424922 CTDP1Q9Y5B0 961 aaPredicted RBP17.02■□□□□ 0.32
CALD1-206ENST00000424922 VWA5AO00534 786 aa17.02■□□□□ 0.31
CALD1-206ENST00000424922 PLCB2Q00722 1185 aa17.02■□□□□ 0.31
CALD1-206ENST00000424922 IQCB1Q15051 598 aa17.02■□□□□ 0.31
CALD1-206ENST00000424922 TREML2Q5T2D2 321 aa17.02■□□□□ 0.31
CALD1-206ENST00000424922 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.31
CALD1-206ENST00000424922 FBXO2Q9UK22 296 aaPredicted RBP17.02■□□□□ 0.31
CALD1-206ENST00000424922 RBBP6Q7Z6E9 1792 aaKnown RBP17.01■□□□□ 0.31
CALD1-206ENST00000424922 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 CCNT1O60563 726 aaKnown RBP17.01■□□□□ 0.31
CALD1-206ENST00000424922 CUTAO60888 179 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 ZBED4O75132 1171 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 PTPREP23469 700 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 CMA1P23946 247 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 GRIN1Q05586 938 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 PPIL2Q13356 520 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 COG2Q14746 738 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 SARM1Q6SZW1 724 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 GADL1Q6ZQY3 521 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 PLA2G4DQ86XP0 818 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
CALD1-206ENST00000424922 ABCB11O95342 1321 aa17.01■□□□□ 0.31
CALD1-206ENST00000424922 A0A0G2JLL6 359 aaPredicted RBP17■□□□□ 0.31
CALD1-206ENST00000424922 CXCL11O14625 94 aa17■□□□□ 0.31
CALD1-206ENST00000424922 CELF2O95319 508 aaKnown RBP17■□□□□ 0.31
CALD1-206ENST00000424922 HOXA13P31271 388 aaPredicted RBP17■□□□□ 0.31
CALD1-206ENST00000424922 DSG3P32926 999 aa17■□□□□ 0.31
CALD1-206ENST00000424922 ATP2C1P98194 919 aaPredicted RBP17■□□□□ 0.31
CALD1-206ENST00000424922 PRRT2Q7Z6L0 340 aaPredicted RBP17■□□□□ 0.31
CALD1-206ENST00000424922 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
CALD1-206ENST00000424922 SRPRBQ9Y5M8 271 aaKnown RBP17■□□□□ 0.31
CALD1-206ENST00000424922 CFBP00751 764 aa17■□□□□ 0.31
CALD1-206ENST00000424922 CDC25BP30305 580 aa17■□□□□ 0.31
CALD1-206ENST00000424922 ZNF75DP51815 510 aa17■□□□□ 0.31
CALD1-206ENST00000424922 SHC4Q6S5L8 630 aa17■□□□□ 0.31
CALD1-206ENST00000424922 TBC1D5Q92609 795 aa17■□□□□ 0.31
CALD1-206ENST00000424922 KCNH4Q9UQ05 1017 aa17■□□□□ 0.31
CALD1-206ENST00000424922 FDX1P10109 184 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 SPECC1Q5M775 1068 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 C4orf32Q8N8J7 132 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
CALD1-206ENST00000424922 ANO3Q9BYT9 981 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 MORC2Q9Y6X9 1032 aaPredicted RBP16.99■□□□□ 0.31
CALD1-206ENST00000424922 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 ALAS1P13196 640 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 NDUFA8P51970 172 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 FKBP1BP68106 108 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 AP3B2Q13367 1082 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 PROCA1Q8NCQ7 364 aaPredicted RBP16.99■□□□□ 0.31
CALD1-206ENST00000424922 TIGD1Q96MW7 591 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 TTC12Q9H892 705 aaPredicted RBP16.99■□□□□ 0.31
CALD1-206ENST00000424922 HOMER2Q9NSB8 354 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 HOXC10Q9NYD6 342 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 ADAMTS5Q9UNA0 930 aa16.99■□□□□ 0.31
CALD1-206ENST00000424922 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 EDIL3O43854 480 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 GJA5P36382 358 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 RESP18Q5W5W9 173 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 FERMT2Q96AC1 680 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms