RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ACRP10323 421 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 DNAJB2P25686 324 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 CYP2C18P33260 490 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 ALDH5A1P51649 535 aaPredicted RBP15.26■□□□□ 0.03
VRK3-203ENST00000424804 ZNF543Q08ER8 600 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 ITGA7Q13683 1181 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 CCDC96Q2M329 555 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 ZNF365Q70YC5 407 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 VTI1AQ96AJ9 217 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 PPP1R12CQ9BZL4 782 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 VTA1Q9NP79 307 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 CHD7Q9P2D1 2997 aa15.26■□□□□ 0.03
VRK3-203ENST00000424804 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 GBF1Q92538 1859 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 NEDD4P46934 1319 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 LAMA4Q16363 1823 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 CABYRO75952 493 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 EDNRBP24530 442 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 PBX2P40425 430 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 PSMC6P62333 389 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 PPIGQ13427 754 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■■■■□ 22
VRK3-203ENST00000424804 DUSP28Q4G0W2 176 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 KIAA1211Q6ZU35 1233 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 MAFAQ8NHW3 353 aaPredicted RBP15.25■□□□□ 0.03
VRK3-203ENST00000424804 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 TOMM22Q9NS69 142 aa15.25■□□□□ 0.03
VRK3-203ENST00000424804 CXXC1Q9P0U4 656 aaPredicted RBP15.25■□□□□ 0.03
VRK3-203ENST00000424804 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 HIP1O00291 1037 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 B4GALT4O60513 344 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 GSPT1P15170 499 aaKnown RBP15.24■□□□□ 0.03
VRK3-203ENST00000424804 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
VRK3-203ENST00000424804 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
VRK3-203ENST00000424804 NOL8Q76FK4 1167 aaKnown RBP15.24■□□□□ 0.03
VRK3-203ENST00000424804 HERVK_113Q902F9 699 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 ANKS1AQ92625 1134 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
VRK3-203ENST00000424804 PBX4Q9BYU1 374 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 AP5M1Q9H0R1 490 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 WNT8AQ9H1J5 351 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 IL23AQ9NPF7 189 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 TTC28Q96AY4 2481 aa15.24■□□□□ 0.03
VRK3-203ENST00000424804 WDR19Q8NEZ3 1342 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 TLR3O15455 904 aaKnown RBP15.23■□□□□ 0.03
VRK3-203ENST00000424804 PCP11498 1178 aaKnown RBP15.23■□□□□ 0.03
VRK3-203ENST00000424804 RPS6P62753 249 aaKnown RBP15.23■□□□□ 0.03
VRK3-203ENST00000424804 MFSD6Q6ZSS7 791 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 TMEM199Q8N511 208 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 USP38Q8NB14 1042 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 ZKSCAN3Q9BRR0 538 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 WDR11Q9BZH6 1224 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 IL25Q9H293 177 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 ZNF576Q9H609 170 aa15.23■□□□□ 0.03
VRK3-203ENST00000424804 SCN5AQ14524 2016 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
VRK3-203ENST00000424804 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 PURAQ00577 322 aaKnown RBP15.22■□□□□ 0.03
VRK3-203ENST00000424804 CENPQQ7L2Z9 268 aaPredicted RBP15.22■□□□□ 0.03
VRK3-203ENST00000424804 SKAP1Q86WV1 359 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 DGKHQ86XP1 1220 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 RGS22Q8NE09 1264 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 COPS5Q92905 334 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 TIFAQ96CG3 184 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 UBA5Q9GZZ9 404 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 ALDH8A1Q9H2A2 487 aaPredicted RBP15.22■□□□□ 0.03
VRK3-203ENST00000424804 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
VRK3-203ENST00000424804 MUC3AQ02505 3323 aa15.22■□□□□ 0.03
VRK3-203ENST00000424804 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 ARIH2O95376 493 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 FOSL2P15408 326 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 CALML3P27482 149 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 CCL23P55773 120 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 RNF207Q6ZRF8 634 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 HIPK3Q9H422 1215 aa15.21■□□□□ 0.03
VRK3-203ENST00000424804 REV3LO60673 3130 aa15.21■□□□□ 0.02
VRK3-203ENST00000424804 TET1Q8NFU7 2136 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 ZEB2O60315 1214 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 CCDC62Q6P9F0 684 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 PSRC1Q6PGN9 363 aaPredicted RBP15.2■□□□□ 0.02
VRK3-203ENST00000424804 DNERQ8NFT8 737 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 PPP1R13LQ8WUF5 828 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 ESR2Q92731 530 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
VRK3-203ENST00000424804 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 COL20A1Q9P218 1284 aa15.2■□□□□ 0.02
VRK3-203ENST00000424804 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
VRK3-203ENST00000424804 KIAA1217Q5T5P2 1943 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 A6NJR5 290 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 ZNF213O14771 459 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 KDM4AO75164 1064 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 FGBP02675 491 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 ADGRE1Q14246 886 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 GPATCH4Q5T3I0 446 aaKnown RBP15.19■□□□□ 0.02
VRK3-203ENST00000424804 ADGRF4Q8IZF3 695 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms