RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PPFIBP1Q86W92 1011 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 C19orf47Q8N9M1 422 aaKnown RBP3.8□□□□□ -1.8
PMS1-209ENST00000424059 TP53I13Q8NBR0 393 aaPredicted RBP3.8□□□□□ -1.8
PMS1-209ENST00000424059 OR6P1Q8NGX9 317 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 ZNF214Q9UL59 606 aaPredicted RBP3.8□□□□□ -1.8
PMS1-209ENST00000424059 ADRB1P08588 477 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 CD247P20963 164 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 KCNC1P48547 511 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 OS9Q13438 667 aaPredicted RBP3.8□□□□□ -1.8
PMS1-209ENST00000424059 SKOR2Q2VWA4 1001 aaPredicted RBP3.8□□□□□ -1.8
PMS1-209ENST00000424059 HSP90AB4PQ58FF6 505 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 CABP7Q86V35 215 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 TMTC2Q8N394 836 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 FIBCD1Q8N539 461 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 FEZF2Q8TBJ5 459 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 TSPAN17Q96FV3 270 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 WHRNQ9P202 907 aa3.8□□□□□ -1.8
PMS1-209ENST00000424059 TRBV23OR9-2A0A075B6M9 112 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 E9PSI1 815 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 CLGNO14967 610 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 L1CAMP32004 1257 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 SLURP1P55000 103 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 EFEMP1Q12805 493 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 AXDND1Q5T1B0 1012 aaPredicted RBP3.79□□□□□ -1.8
PMS1-209ENST00000424059 TMCO4Q5TGY1 634 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 EEF1DP3Q658K8 133 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 BICRALQ6AI39 1079 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 UNC5AQ6ZN44 842 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 PRRT2Q7Z6L0 340 aaPredicted RBP3.79□□□□□ -1.8
PMS1-209ENST00000424059 NETO2Q8NC67 525 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 GBP3Q9H0R5 595 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 PCDH18Q9HCL0 1135 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 NUDT5Q9UKK9 219 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 PMF1-BGLAPU3KQ54 211 aa3.79□□□□□ -1.8
PMS1-209ENST00000424059 LOC102724159A0A0B4J2E5 919 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 SH3D21A4FU49 640 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 FFAR3O14843 346 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 NCAM1P13591 858 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 CANXP27824 592 aaKnown RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 HTRA3P83110 453 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 ZNF200P98182 395 aaPredicted RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 FANCCQ00597 558 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 GRB10Q13322 594 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 SLC9A5Q14940 896 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 PWP2Q15269 919 aaKnown RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 TDRD10Q5VZ19 366 aaKnown RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 LIPIQ6XZB0 460 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 SGSM3Q96HU1 749 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 PHAXQ9H814 394 aaKnown RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 JAG2Q9Y219 1238 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 CD3EP07766 207 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 ZNF16P17020 682 aaPredicted RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 VAMP1P23763 118 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 FOXO4P98177 505 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 VWA3BQ502W6 1294 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 LDLRAD1Q5T700 205 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 DCAF15Q66K64 600 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 B3GNT8Q7Z7M8 397 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 SAPCD2Q86UD0 394 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 CPA5Q8WXQ8 436 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 FCRL3Q96P31 734 aaPredicted RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 ZNF451Q9Y4E5 1061 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 RIPOR2Q9Y4F9 1068 aa3.78□□□□□ -1.8
PMS1-209ENST00000424059 LAS1LQ9Y4W2 734 aaKnown RBP3.78□□□□□ -1.8
PMS1-209ENST00000424059 AURKAO14965 403 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 ZBTB7AO95365 584 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 GLI4P10075 376 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 FAM50AQ14320 339 aaKnown RBP3.77□□□□□ -1.81
PMS1-209ENST00000424059 ZNF622Q969S3 477 aaKnown RBP eCLIP3.77□□□□□ -1.81
PMS1-209ENST00000424059 PEX11GQ96HA9 241 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 CRBNQ96SW2 442 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 SUSD2Q9UGT4 822 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 DBR1Q9UK59 544 aaKnown RBP3.77□□□□□ -1.81
PMS1-209ENST00000424059 PRDM4Q9UKN5 801 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 FAN1Q9Y2M0 1017 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 F8W031 263 aaPredicted RBP3.77□□□□□ -1.81
PMS1-209ENST00000424059 LIMS1P48059 325 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 NCKAP1LP55160 1127 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 PRR5P85299 388 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 VMACQ2NL98 169 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 ZNF654Q8IZM8 581 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 FNIP1Q8TF40 1166 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 ALG3Q92685 438 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 BRF1Q92994 677 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 KLHL25Q9H0H3 589 aa3.77□□□□□ -1.81
PMS1-209ENST00000424059 NOL6Q9H6R4 1146 aaKnown RBP3.77□□□□□ -1.81
PMS1-209ENST00000424059 DDX41Q9UJV9 622 aaKnown RBP3.77□□□□□ -1.81
PMS1-209ENST00000424059 FAM86C2PA6NEL3 165 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 PPM1BO75688 479 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 ASGR2P07307 311 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 NAT2P11245 290 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 IFNGR1P15260 489 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 ATF2P15336 505 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 SOX9P48436 509 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 NFKB2Q00653 900 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 CNGB1Q14028 1251 aaPredicted RBP3.76□□□□□ -1.81
PMS1-209ENST00000424059 RCC1LQ96I51 464 aaKnown RBP3.76□□□□□ -1.81
PMS1-209ENST00000424059 ZDHHC15Q96MV8 337 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 HAUS7Q99871 368 aa3.76□□□□□ -1.81
PMS1-209ENST00000424059 USP40Q9NVE5 1235 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms