RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
HDAC6-205ENST00000423941 KIAA0100Q14667 2235 aaKnown RBP21.36■■□□□ 1.01
HDAC6-205ENST00000423941 SNAI1O95863 264 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-205ENST00000423941 NEK4P51957 841 aa21.36■■□□□ 1.01
HDAC6-205ENST00000423941 ANKRD1Q15327 319 aa21.36■■□□□ 1.01
HDAC6-205ENST00000423941 SLC30A10Q6XR72 485 aa21.36■■□□□ 1.01
HDAC6-205ENST00000423941 LARP6Q9BRS8 491 aaKnown RBP21.36■■□□□ 1.01
HDAC6-205ENST00000423941 RNF208Q9H0X6 261 aa21.36■■□□□ 1.01
HDAC6-205ENST00000423941 TPCN1Q9ULQ1 816 aa21.36■■□□□ 1.01
HDAC6-205ENST00000423941 POTEFA5A3E0 1075 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 IFNAR1P17181 557 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 CAPN2P17655 700 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 DNERQ8NFT8 737 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 TBC1D32Q96NH3 1257 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 PURBQ96QR8 312 aaKnown RBP21.35■■□□□ 1.01
HDAC6-205ENST00000423941 TMEM106CQ9BVX2 250 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 CRISPLD2Q9H0B8 497 aa21.35■■□□□ 1.01
HDAC6-205ENST00000423941 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.35■■□□□ 1.01
HDAC6-205ENST00000423941 SEC63Q9UGP8 760 aaKnown RBP21.35■■□□□ 1.01
HDAC6-205ENST00000423941 V9GY48 417 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-205ENST00000423941 PTPDC1A2A3K4 754 aa21.34■■□□□ 1.01
HDAC6-205ENST00000423941 CCND3P30281 292 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-205ENST00000423941 GJA8P48165 433 aa21.34■■□□□ 1.01
HDAC6-205ENST00000423941 IL27Q8NEV9 243 aa21.34■■□□□ 1.01
HDAC6-205ENST00000423941 SYTL5Q8TDW5 730 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-205ENST00000423941 PIBF1Q8WXW3 757 aa21.34■■□□□ 1.01
HDAC6-205ENST00000423941 KATNBL1Q9H079 304 aa21.34■■□□□ 1.01
HDAC6-205ENST00000423941 NCOA5Q9HCD5 579 aaKnown RBP21.34■■□□□ 1.01
HDAC6-205ENST00000423941 COL20A1Q9P218 1284 aa21.34■■□□□ 1.01
HDAC6-205ENST00000423941 NAP1L2Q9ULW6 460 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-205ENST00000423941 ASB14A6NK59 587 aa21.33■■□□□ 1.01
HDAC6-205ENST00000423941 PRPF3O43395 683 aaKnown RBP21.33■■□□□ 1.01
HDAC6-205ENST00000423941 PFKFB2O60825 505 aa21.33■■□□□ 1.01
HDAC6-205ENST00000423941 ZNF865P0CJ78 1059 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-205ENST00000423941 EDNRBP24530 442 aa21.33■■□□□ 1.01
HDAC6-205ENST00000423941 RGS19P49795 217 aa21.33■■□□□ 1.01
HDAC6-205ENST00000423941 CCT2P78371 535 aaKnown RBP21.33■■□□□ 1.01
HDAC6-205ENST00000423941 LHX8Q68G74 356 aa21.33■■□□□ 1.01
HDAC6-205ENST00000423941 ADD3Q9UEY8 706 aaKnown RBP21.33■■□□□ 1.01
HDAC6-205ENST00000423941 FRMPD3Q5JV73 1810 aa21.33■■□□□ 1.01
HDAC6-205ENST00000423941 LRRC37A2A6NM11 1700 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 hCG_1642624A0A1W2PR95 340 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 SGPL1O95470 568 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 ALDH5A1P51649 535 aaPredicted RBP21.32■■□□□ 1
HDAC6-205ENST00000423941 PKN1Q16512 942 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 PRAMEF19Q5SWL8 479 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 IFFO2Q5TF58 517 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 ARMCX2Q7L311 632 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 TEX2Q8IWB9 1127 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 RNF26Q9BY78 433 aaPredicted RBP21.32■■□□□ 1
HDAC6-205ENST00000423941 ABHD16BQ9H3Z7 469 aa21.32■■□□□ 1
HDAC6-205ENST00000423941 UPF2Q9HAU5 1272 aaKnown RBP21.32■■□□□ 1
HDAC6-205ENST00000423941 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.32■■□□□ 1
HDAC6-205ENST00000423941 hCG_1984214I3L0E3 225 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 PIK3CDO00329 1044 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 SEPT4O43236 478 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 CFBP00751 764 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 MYCP01106 439 aaPredicted RBP21.31■■□□□ 1
HDAC6-205ENST00000423941 CALML3P27482 149 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 PFKFB3Q16875 520 aaPredicted RBP21.31■■□□□ 1
HDAC6-205ENST00000423941 ZNF713Q8N859 430 aaPredicted RBP21.31■■□□□ 1
HDAC6-205ENST00000423941 U2AF1L4Q8WU68 220 aaKnown RBP21.31■■□□□ 1
HDAC6-205ENST00000423941 SHISA4Q96DD7 197 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 TAAR1Q96RJ0 339 aa21.31■■□□□ 1
HDAC6-205ENST00000423941 RBM27Q9P2N5 1060 aaKnown RBP21.31■■□□□ 1
HDAC6-205ENST00000423941 MEIS2O14770 477 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 SCRN1Q12765 414 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 ME3Q16798 604 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 WWC2Q6AWC2 1192 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 TYW1BQ6NUM6 668 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 DEFB118Q96PH6 123 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 BARHL2Q9NY43 387 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 OGDHLQ9ULD0 1010 aa21.3■■□□□ 1
HDAC6-205ENST00000423941 GCOM1H8Y6P7 765 aaPredicted RBP21.29■■□□□ 1
HDAC6-205ENST00000423941 MSCO60682 206 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 POLR2MP0CAP2 368 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 EN2P19622 333 aaPredicted RBP21.29■■□□□ 1
HDAC6-205ENST00000423941 SOX10P56693 466 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 ACVR2BQ13705 512 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 PHKBQ93100 1093 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 IWS1Q96ST2 819 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 SLKQ9H2G2 1235 aaPredicted RBP21.29■■□□□ 1
HDAC6-205ENST00000423941 DDX20Q9UHI6 824 aaKnown RBP21.29■■□□□ 1
HDAC6-205ENST00000423941 CNPY2Q9Y2B0 182 aa21.29■■□□□ 1
HDAC6-205ENST00000423941 STXBP3O00186 592 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 LARGE1O95461 756 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 SCG2P13521 617 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 STK3Q13188 491 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 RABEP1Q15276 862 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 PPP1R18Q6NYC8 613 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 UBE2Q1Q7Z7E8 422 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 NSUN6Q8TEA1 469 aaKnown RBP21.28■■□□□ 1
HDAC6-205ENST00000423941 GPKOWQ92917 476 aaPredicted RBP eCLIP21.28■■□□□ 14e-16■■■□□ 16.7
HDAC6-205ENST00000423941 DDX49Q9Y6V7 483 aaKnown RBP21.28■■□□□ 1
HDAC6-205ENST00000423941 FRMPD4Q14CM0 1322 aa21.28■■□□□ 1
HDAC6-205ENST00000423941 HOXA13P31271 388 aaPredicted RBP21.27■■□□□ 1
HDAC6-205ENST00000423941 TAPT1Q6NXT6 567 aa21.27■■□□□ 1
HDAC6-205ENST00000423941 RMDN3Q96TC7 470 aa21.27■■□□□ 1
HDAC6-205ENST00000423941 PSTPIP2Q9H939 334 aa21.27■■□□□ 1
HDAC6-205ENST00000423941 PXMP2Q9NR77 195 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms